Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00276 ATGGCGACAACCGTGAGTGGAGTTTACTCGGCCATCCATGCCGTCGTGGACTTGGGAGACTCTGTCATCATGAACGCTGCTCCCAAGCACGAACGCCGCTGGGCGTCCGACACGGTGCCGGAGATTGCATTCGTCAGCGGCGCCACTTCTCCGGGAACCGACTCCTGCTCCGTAGCCGACGAGTACGTCGAGGTCACTCTCGACGTTCAAGACGATCACACCATCGTTCTCCGCGGCGTTGAGCCGGTGACTGTCGTTAACGTCGACGACGGCTATGCTCCAAGCGGAAGCGAAACTCCGGTGTCCTCCGCTTGGTCGCCGTCGATCAGGAGGAGCTCTCCCAACCCGTGGCGACAGTTCTCGCAGGAGCTTAAGGCTGAGGCGGTTGCGAAGGCGAGGCAGTTCTCGCAGGAGCTCAAGGCGGAGCTGCGGCGGTTCTCGTGGAGCCAGGGCGGATCTGAAACGGCGTTGGTGCGGCGCGATATCAGGAAGCAACGCGCTCAGCTTGAGCGCAACCGCTCTGGTGCGATGAAAGCTCTCCGTGGACTGAAATTCATTAGCAGTAAATCAAACGGCGTTGATGCCTGGAACCAGGTGCAAGGCAATTTCGATAGTCTTGCTAAGGACGGTTTTCTCTACCGCACCGATTTTGCGCAATGCATAGGGATGAAGGACTCTAAGGAGTTCGCTCTGGAACTGTTCGATGCTCTGGGTCGTAGACGAAGACTCAGTGTTGAAAAGATCAGCAGAGACGAGCTTAGCGAATTCTGGTCGCAAATTACCGATCAAAGCTTTGATTCACGGCTCCAGATCTTCTTTGATATGGTGGACAAGAACGAAGATGGGAGAATCACCGAAGAAGAAGTGAAAGAGATCATTATGCTAAGCGCTTCAGCAAATAAGTTATCCAGATTGAAAGAGCAAGCCGAAGAATACGCAGCTCTGATCATGGAAGAGTTAGACCCTGAAAGATTTGGCTACATTGAGCTATGGCAATTGGAGACGCTTCTGTTACAAAAGGATACATATCTGAACTACAGTCAAGCACTAAGTTACACCAGTCAAGCTTTGAGCCAGAACCTACAAATAAGGGCAAGAAGTCCGATACGCAGGATGAGCCGCAGGATGATCTACTATTTGCAAGAAAATTGGAGGAGGCTTTGGATTTTAGCACTGTGGGTTTCCGTCATGATTGGGCTGTTTACGTGGAAATTCATGGACTACAAGCGAAAAAATGCTTATCATGTGATGGGTTACTGTCTCCTCGCGGCCAAAGGTGCTGCTGAGACACTCAAGTTCAACATGGCACTCATACTCTTTCCCATCTGCAGAAATACCATAACTTGGCTCAGGTCCACCAACTTGGCTTATATCGCACCTTTCGATGATAACATCAACTTTCATAAGACAATTGCTGCAGCAGTACTGATTGGTGTGATACTTCATGCCGGGAATCACCTTGCTTGTGATTTTCCAAGACTTGTTAATTCGTCTGAAGAAATTTATGAGAAGTATTTGAATGGCGTATTTGGTGATCACAAACCCGGTTACGGAGACCTCATTAAGGGGGTTGAGGGCGTGACTGGAATTCTGATGGTGATTTTGATGGCAATAGCATTCACTCTTGCAACAAAATGGTTCAGAAGAAATCTTATTAAGCTTCCTAAACCGTTTAATCGGCTCACTGGTTTCAATGCGTTCTGGTATTCGCACCATCTATTTGTCATTGTCTATGCCCTGCTCATCGTTCATGGTGTAAATCTTTACCTCGAGCGCAAATGGCACCTTCAAACGACATGGATGTATCTTGCAGTTCCAATCGTCCTTTATGTGGGAGAAAGAACGTTGAGATTCTTCCGTTCTGGTTTCTATACAGTCCGTCTTATAAAGGTTGCCATTTATACTGGAAATGTTCTGACATTGCAAATGTCGAAGCCGCCTCAATTTCGTTACAAGAGTGGACAGTACATGTTTGTACAATGTCCTGCTGTTTCTCCATTTGAGTGGCATCCGTTTTCTATTACCTCTGCCCCTGGCGATGACTACCTGAGTGTTCACATACGGCAACTGGGAGATTGGACGCAGGAGCTCAGAAAGGTATTCTCTGCGGCCTGTGAGCCTCCCGTAGCTGGGAAGAGCGGCCTTCTCAGGGCCGATGAAACCACCAAGAAATGCTTACCAAAGCTAAGGATAGATGGACCTTACGGTGCGCCAGCACAAGACTACAGAAACTATGATGTCCTACTACTTGTCGGTCTCGGGATTGGAGCAACACCTTTTATTAGCATTCTAAAAGATCTTCTCAACAATATTGTCAAAATGGAGGAGCTGGCGGATTCAGTCTCTGATTCAAGTAGAGGTTCAGACCTTAGCACTGGGAGTGCAGATTCGCTGTCTTCTAATAAGATTTCTCCGAAACGGAAGAAGACACTCAAGACTACCAATTCTTATTTCTACTGGGTAACAAGGGAACAAGGTTCTTTCGATTGGTTTAAAGGGGTCATGAATGAAGTTGCTGAACTTGATCAAAGGGGTGTTATTGAGATGCACAACTACTTAACTAGCGTATACGAGGAAGGCGATGCCAGATCCGCCCTCATTACTATGGTGCAAGCCCTCAACCACGCAAAAAATGGAGTTGATGTTGTTTCTGGGACTAGGGTGAGAACTCATTTTGCTAGGCCTAACTGGAAGAAGGTTTTCTCTAGAATATGTTCAAAGCACTGCAATGGACGAATAGGGGTATTCTATTGTGGCGCACCGGTTTTGGCCAAAGAATTGAGCAAGCTCTGCTTCGAGTTCAACGAAAAAGGTCAAACAAAATTTGAGTTCCATAAGGAGCATTTCTAA 2850 0.4761 MATTVSGVYSAIHAVVDLGDSVIMNAAPKHERRWASDTVPEIAFVSGATSPGTDSCSVADEYVEVTLDVQDDHTIVLRGVEPVTVVNVDDGYAPSGSETPVSSAWSPSIRRSSPNPWRQFSQELKAEAVAKARQFSQELKAELRRFSWSQGGSETALVRRDIRKQRAQLERNRSGAMKALRGLKFISSKSNGVDAWNQVQGNFDSLAKDGFLYRTDFAQCIGMKDSKEFALELFDALGRRRRLSVEKISRDELSEFWSQITDQSFDSRLQIFFDMVDKNEDGRITEEEVKEIIMLSASANKLSRLKEQAEEYAALIMEELDPERFGYIELWQLETLLLQKDTYLNYSQALSYTSQALSQNLQIRARSPIRRMSRRMIYYLQENWRRLWILALWVSVMIGLFTWKFMDYKRKNAYHVMGYCLLAAKGAAETLKFNMALILFPICRNTITWLRSTNLAYIAPFDDNINFHKTIAAAVLIGVILHAGNHLACDFPRLVNSSEEIYEKYLNGVFGDHKPGYGDLIKGVEGVTGILMVILMAIAFTLATKWFRRNLIKLPKPFNRLTGFNAFWYSHHLFVIVYALLIVHGVNLYLERKWHLQTTWMYLAVPIVLYVGERTLRFFRSGFYTVRLIKVAIYTGNVLTLQMSKPPQFRYKSGQYMFVQCPAVSPFEWHPFSITSAPGDDYLSVHIRQLGDWTQELRKVFSAACEPPVAGKSGLLRADETTKKCLPKLRIDGPYGAPAQDYRNYDVLLLVGLGIGATPFISILKDLLNNIVKMEELADSVSDSSRGSDLSTGSADSLSSNKISPKRKKTLKTTNSYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDVVSGTRVRTHFARPNWKKVFSRICSKHCNGRIGVFYCGAPVLAKELSKLCFEFNEKGQTKFEFHKEHF 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00276 949 MobiDBLite consensus disorder prediction 782 804 - -
Phco4g00276 949 MobiDBLite consensus disorder prediction 91 116 - -
Phco4g00276 949 Gene3D - 169 285 - -
Phco4g00276 949 Gene3D Translation factors 613 702 - -
Phco4g00276 949 Coils Coil 295 315 - -
Phco4g00276 949 Coils Coil 159 179 - -
Phco4g00276 949 MobiDBLite consensus disorder prediction 96 116 - -
Phco4g00276 949 Pfam Respiratory burst NADPH oxidase 168 267 IPR013623 GO:0004601|GO:0050664
Phco4g00276 949 CDD NOX_Duox_like_FAD_NADP 636 891 - -
Phco4g00276 949 Coils Coil 764 784 - -
Phco4g00276 949 Pfam Ferric reductase like transmembrane component 426 582 IPR013130 -
Phco4g00276 949 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 621 741 IPR017927 GO:0016491
Phco4g00276 949 FunFam Respiratory burst oxidase protein A 736 949 - -
Phco4g00276 949 SUPERFAMILY Riboflavin synthase domain-like 624 738 IPR017938 -
Phco4g00276 949 PANTHER NADPH OXIDASE 229 949 - -
Phco4g00276 949 PRINTS Cytochrome B-245 heavy chain signature 727 740 IPR000778 GO:0016020|GO:0016491
Phco4g00276 949 PRINTS Cytochrome B-245 heavy chain signature 527 550 IPR000778 GO:0016020|GO:0016491
Phco4g00276 949 PRINTS Cytochrome B-245 heavy chain signature 750 767 IPR000778 GO:0016020|GO:0016491
Phco4g00276 949 SFLD NADPH oxidase subgroup (NOX) 127 949 - -
Phco4g00276 949 FunFam Respiratory burst oxidase homolog A 612 704 - -
Phco4g00276 949 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 742 949 IPR039261 -
Phco4g00276 949 MobiDBLite consensus disorder prediction 782 801 - -
Phco4g00276 949 CDD EFh 247 294 IPR002048 GO:0005509
Phco4g00276 949 Pfam Ferric reductase NAD binding domain 745 931 IPR013121 GO:0016491
Phco4g00276 949 SUPERFAMILY EF-hand 197 346 IPR011992 -
Phco4g00276 949 ProSiteProfiles EF-hand calcium-binding domain profile. 264 299 IPR002048 GO:0005509
Phco4g00276 949 Gene3D - 736 949 IPR039261 -
Phco4g00276 949 FunFam Respiratory burst oxidase homolog A 169 285 - -
Phco4g00276 949 ProSitePatterns EF-hand calcium-binding domain. 277 289 IPR018247 -
Phco4g00276 949 Pfam FAD-binding domain 624 738 IPR013112 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00276 Phco-Chr4 1745304 1754519 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00276 4 1745304 1754519 Phco4g00276 4 1745304 1754519 ECH
Phco4g00276 4 1745304 1754519 Phco4g03338 4 53881214 53889866 PCT