Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00263 ATGGTTCTATTCAAAGGATTTAAAATGACAGAGACAGACACCGATGATGTTGGTTTGGAGTGTAACTTCGCGTTCGCATTCGACAACATCAATTTCTCCGATCGAATTCTCAACATTGAGGTTATACCCGACCCTCATTTCAGCCGCACCCAATCCCGTTCTCTGTCCACCGTAGCTCCCAATCGCAAGAGAAGCAGACACGGTCTTGTGAAAGGCAATGATGTCCTCTTGCAGCCCGAGGAAAAGGTAAATTGTAATTTATCAGATGCTGAGGAAGCTGTGGCAATTACTGAGGCATCACCGTCAGGTGATGAAGTTTCTCATGGAAATGATTCATTATTGGACATGAGTTGGTCAAAAGTTCTAAGAGTTAGGACCATACATATAAGTTCTCCAATTCTTGCAGCAAAAAGCCCCTTCTTTTATGAGTTGTTTTCAAATGTGACGAGAGAGTCTAAGCAACAAAATGTTACTCTTCGTATCCACAATTCTGAAGAGGCTGCCGTTATGGACCTACTCAATTTCATGTATAGTAATACTTTATCAAGCACGACATCTGCTGCTGTATTGGATGTGCTGATGGCTGCTGATAAATTTGATGTTGTGTCATGCATAAGTTATTGCACTAGGATGTTGGGGTTAATGCCTATGACTTGTGAGTCTGCCTTACTTTATTTGGATCTTCCTTCAAGCATTTTGAAGTCAGATGCAATTCAACCACTGATAGAGACAGCAAAGTTGTTTCTTGCGTCACACTACAGAGACATAACAAAGTTTGCAGATGAAGCACTGAATTTGCCCTTAGCTGGCATTGAAGCAGTGCTGTCTAGCGATGACCTCCTGATGCCTTCCGAAGATGCTGTCTATGAGTTTGTGCTCAAGTGGGCTAGGATACATTATCCCAAAATTGAGGACCGGCAAGATGTCCTTGGAGCACGCCTTGGTCGACTCATACGTTTTCCACACATGAGCTGCCGAAAACTGGAGATGGTCTTAAAATGCGACCACTTCCATCCTGACTTTGCATCAAAGGTTGTTCTTGAAGCTCTTTTCTTCAAGGCAGAGACACCACGTCGACAACGCTCTCTTGCTGCTCAGGATGCCAGCACCACCTGCTCTCGGTTTGTTGAGCGAGCTTACATGCACCGCAGTGTGAAGTTGGTTGAATTTGCATTACCTCGTCCGCGGGGTATGATATACCTTGACCTAAAGAAAGAAGAATGTGCGCAATGTTTTCCTAATGGTCGAATTTACTCTAAGGCATTCCACCTAGGGAAGGAGTTGTTTTTCTTGTCAGCTTGCTGCAATGTGGACCACCACAACCCATTCCGTTGCTTTGGCCTTTTCTTAGCAGTGAAGTTCAAGGAGTCAGATTCTCTTCGTGTTGAATGTGAATTTGCTGCTAGATCAAAATTCACAGAGGAGTATATAAGCATACGCAAAGGAAATTATACTTTCACGAGAGGGAAGGCTGTAGGGCATAGGAACCTGTTTGCTATACCATGGACTACATTCATAGCTGATGATAGCCATTACTTCATCAAGGGATTACTTCATCTAAGGGCTGAACTTACCATTAGACAATGA 1587 0.4354 MVLFKGFKMTETDTDDVGLECNFAFAFDNINFSDRILNIEVIPDPHFSRTQSRSLSTVAPNRKRSRHGLVKGNDVLLQPEEKVNCNLSDAEEAVAITEASPSGDEVSHGNDSLLDMSWSKVLRVRTIHISSPILAAKSPFFYELFSNVTRESKQQNVTLRIHNSEEAAVMDLLNFMYSNTLSSTTSAAVLDVLMAADKFDVVSCISYCTRMLGLMPMTCESALLYLDLPSSILKSDAIQPLIETAKLFLASHYRDITKFADEALNLPLAGIEAVLSSDDLLMPSEDAVYEFVLKWARIHYPKIEDRQDVLGARLGRLIRFPHMSCRKLEMVLKCDHFHPDFASKVVLEALFFKAETPRRQRSLAAQDASTTCSRFVERAYMHRSVKLVEFALPRPRGMIYLDLKKEECAQCFPNGRIYSKAFHLGKELFFLSACCNVDHHNPFRCFGLFLAVKFKESDSLRVECEFAARSKFTEEYISIRKGNYTFTRGKAVGHRNLFAIPWTTFIADDSHYFIKGLLHLRAELTIRQ 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00263 528 PANTHER OS02G0260700 PROTEIN 13 527 IPR045890 -
Phco4g00263 528 FunFam BTB/POZ domain-containing protein POB1 250 354 - -
Phco4g00263 528 Gene3D - 250 354 - -
Phco4g00263 528 Pfam BTB/POZ domain 125 212 IPR000210 GO:0005515
Phco4g00263 528 SMART BTB_4 81 216 IPR000210 GO:0005515
Phco4g00263 528 Gene3D Potassium Channel Kv1.1; Chain A 116 249 IPR011333 -
Phco4g00263 528 FunFam BTB/POZ domain-containing protein POB1 111 249 - -
Phco4g00263 528 CDD BTB_POZ_ZBTB_KLHL-like 125 199 - -
Phco4g00263 528 SUPERFAMILY POZ domain 126 212 IPR011333 -
Phco4g00263 528 ProSiteProfiles BTB domain profile. 110 185 IPR000210 GO:0005515
Phco4g00263 528 Pfam BTB And C-terminal Kelch 240 329 IPR011705 -
Phco4g00263 528 SUPERFAMILY TRAF domain-like 413 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00263 Phco-Chr4 1662740 1667450 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00263 4 1662740 1667450 Phco4g00263 4 1662740 1667450 ECH