Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00260 ATGAAGAATTCTGCTTCTACTTCTACTTCTAAAGCAGGTGAAGGAGCACAGTCATCACTAGCAAAAAGTGAGAAGAACCCTCTTTATTCTGGAGTTGTTGAACTCGTCAACGACAAGAATGGAATACCCCAACTCATTCTCAAAAATGGTGATGCTTCTGCAACCATTAGTTTGCTGGGAGCTCAGGTTCTTTCTTGGAAAACAAAAGCAACTGGAGAGCTACTCTTTGTAAGCAAGAAAGCAATCTTTGATCCTCCCAGAGCTGTGAGGGGAGGAATTCCAATCTGTTTTCCACAATTCGGAAACAGAGGAGCACTGGAGCAGCATGGATTTGCTAGAAACAGGATCTGGATTATCGAGAAAGATCCTCCACACCTTTCTGGTGATTTCAGTGCAAAAGTTTACATTGATTTGTTGCTTAAACCATACAAAGAAGATAGCAAAATATGGCCACATAGCTTCGAGTTTCGCCTAAGGATTTCTTTGACAGCAGATGGTATTCTGAATTTGACATCACGCATCAGAAATGTTGGTAGCCAAAATTTCAGTTTCTGCATTGGCTATCGTACATATCTTTCCGTCTCAGATGTTAGTGAAGTGAGGATAGAAGGGTTGGAAACTGAGTACTACCTGGACAACCTACTGCAGAAACAACAATTCACAGAGCAGGGAGGTGCTTTGACATTTGAATCCGAGGTTGATAGGATTTATATTAATTCTAACAATATGGTAGCTGTTCTGGATCATCAAAAGAAGAGAACATTTGTGATAAGAAAAGATGGACTCCCTGATGTTGTTATTTGGAATCCTTGGGATAAAAAATCCAAGTCCATAGTAGATCTAGGGGATGAAGAGTACAAGCAAATGCTGTGTGTCGATGGTGCAGCAGTTGAAAAACCAATCCCCTTGAAACCTGGTGAAGAATGGAAAGGCCGTTTAGAATTGTCACTTCTTCAATCTTCTTGA 966 0.4068 MKNSASTSTSKAGEGAQSSLAKSEKNPLYSGVVELVNDKNGIPQLILKNGDASATISLLGAQVLSWKTKATGELLFVSKKAIFDPPRAVRGGIPICFPQFGNRGALEQHGFARNRIWIIEKDPPHLSGDFSAKVYIDLLLKPYKEDSKIWPHSFEFRLRISLTADGILNLTSRIRNVGSQNFSFCIGYRTYLSVSDVSEVRIEGLETEYYLDNLLQKQQFTEQGGALTFESEVDRIYINSNNMVAVLDHQKKRTFVIRKDGLPDVVIWNPWDKKSKSIVDLGDEEYKQMLCVDGAAVEKPIPLKPGEEWKGRLELSLLQSS 321
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00260 321 Pfam Aldose 1-epimerase 45 315 IPR008183 GO:0005975|GO:0016853
Phco4g00260 321 MobiDBLite consensus disorder prediction 1 22 - -
Phco4g00260 321 Gene3D - 18 319 IPR014718 GO:0030246
Phco4g00260 321 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 34 320 - -
Phco4g00260 321 PIRSF PHexose_mutarotase 19 321 IPR025532 -
Phco4g00260 321 SUPERFAMILY Galactose mutarotase-like 38 315 IPR011013 GO:0003824|GO:0005975|GO:0030246
Phco4g00260 321 CDD D-hex-6-P-epi_like 45 316 IPR025532 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco4g00260 Phco-Chr4 1649777 1651568 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00260 4 1649777 1651568 Phco4g00260 4 1649777 1651568 ECH
Phco4g00260 4 1649777 1651568 Phco4g03361 4 54037652 54041414 PCT