Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00251 ATGTCTTCATCGAAGGAGGCGGACCCAACCCTGGGTTACCTCACTCGGAAGGACACGGAGGTGAAGCTTCCGCGTCCAACCAGGGTCAAGAATAAAACCCCTGCTCCTATCCAAATCACTGCCGAGCAAATTCTCCGGGAGGCTCGGGAGCGTCAAGAGGCGGAGATCCGCCCTCCTAAGCAGAAAATCACCGACTCCACCGAGCTCGGCGAGTACCGTCTTCGCAAGCGCAAGGAGTTCGAGGACCTTATCCGCCGCGTTCGATGGAACATTGGCGTGTGGATCAAGTACGCGCATTGGGAGGAATCGCAGAAGGATTTCAAACGCGCGCGTTCCGTTTGGGAGAGGGCGCTGGAGGTGGATTACAAGAACCACACGCTCTGGCTCAAGTACGCGGAGGTCGAGATGAAGAACAAGTTCATAAACCACGCCCGCAACGTGTGGGACCGCGCCGTCACGCTTCTTCCGAGGGTGGATCAGTTGTGGTACAAGTACATTCACATGGAGGAGATGTTAGGCAATGTCGCCGGCGCGAGGCAGGTTTTCGAGAGGTGGATGAAGTGGACTCCGGACCAGCAGGGATGGCTGTCGTACTTAAAATTTGAGCTTAGGTACAATGAAATTGAGCGCGCCAGAGGGATTTTTGAGCGATTTGTCGAGTGCCACCCTCGGGTTGGTGCTTGGATACGCTATGCTAAGTTTGAGATGAAGAATGGCGAGGTTGGGAAGGCTAGGACCGTGTACGAGAGAGCCGTGGATAAGCTATCTGATGACGAGGAAGCAGAGCAGTTATTTGTTGCTTTTGCTGAGTTTGAGGAAAGGTGTAAGGAGACTGAGCGTGCAAGAGCTATCTATAAGTTTGCTCTTGATCATATTCCCAAGGGAAGGGCGGAAGATTTGTATAGAAAATTTGTGGCATTTGAGAAGCAGTATGGGGACAGAGAAGGGATCGAGGATGCCATCGTTGGGAAGAGAAGGTTTCAGTATGAGGACGAAGTGAAGAAGAATCCGTTGAATTATGATTCCTGGTTTGACTACATAAGGTTGGAGGAAAGTGTGGGGGATAAGGAAAGGATCAGGGAGGTTTATGAGAGAGCTATAGCCAATGTTCCCCCGGCGGAGGAGAAGCGCTACTGGCAGCGCTATATTTATTTGTGGATTAATTATGCACTTTATGAAGAGCTTGATGCTGGGGATGCGGAGCGAACAAGGGACGTATACAGGGAGTGCCTCAACCAGATACCTCACAATAAGTTCTCATTTGCAAAATTATGGCTTCTAGCAGCTCAGTTTGAAATACGTCAGCTGAATCTCAAGGCTGCTCGTCAAATATTAGGAAATGCCATTGGAAAGGCTCCTAAAGATAAGATTTTTAAGAAGTATATAGAGATAGAACTGCAGCTTGGTAATATAGACCGGTGCAGAAAACTATATGAAAAATATCTGGAGTGGTCTCCAGAAAATTGTTATGCTTGGAGCAAGTATGCTGAGTTGGAGAGATCGTTATCTGAGACGGATCGAGCCCGAGGAATTTTTGAGCTTGCGATTGCCCAACCAGCATTGGACATGCCTGAGCTCTTGTGGAAGGCATTCATTGACTTTGAGACTGCTGAGGGTGAATTTGATAGAGCAAGAGCACTTTATGAAAGGCTTCTTGACCGAACAAAGCACTTGAAGGTATGGATAAGCTATGCGGAATTTGAGGCAACAGCTATGGATGTGGACAATTTAGACGTAACGGTAACGGAACATGAACAAAAGAAGCAATGCATTGAGCGTGCTAGAAGGGTGTTTGAGAAGGCTCTCAACTACTTCAGATCATCAGCTCCAGATTTGAAAGAAGAAAGGGCAATGTTATTGGAAAAATGGCTCAACATGGAGGCTAAATTTGGAGAGCTGGGTGATGTTAGCTTAGTCCAGTCTAAGCTGCCCAAAAAGCTCAAGAAGAGAAGGCATGTTACCACTGAAGATGGTTCTACTAGAATTGAAGATTTCATCGACTTTTTGTTTCCTGAAGAAAGTCAGACAACAAATCTCAAGATCTTGGAAGCTGCTTACAAATGGAAGAAGCAAAAACAGTCTTCGGATGATTAA 2094 0.4737 MSSSKEADPTLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDSTELGEYRLRKRKEFEDLIRRVRWNIGVWIKYAHWEESQKDFKRARSVWERALEVDYKNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQVFERWMKWTPDQQGWLSYLKFELRYNEIERARGIFERFVECHPRVGAWIRYAKFEMKNGEVGKARTVYERAVDKLSDDEEAEQLFVAFAEFEERCKETERARAIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVKKNPLNYDSWFDYIRLEESVGDKERIREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGDAERTRDVYRECLNQIPHNKFSFAKLWLLAAQFEIRQLNLKAARQILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYEKYLEWSPENCYAWSKYAELERSLSETDRARGIFELAIAQPALDMPELLWKAFIDFETAEGEFDRARALYERLLDRTKHLKVWISYAEFEATAMDVDNLDVTVTEHEQKKQCIERARRVFEKALNYFRSSAPDLKEERAMLLEKWLNMEAKFGELGDVSLVQSKLPKKLKKRRHVTTEDGSTRIEDFIDFLFPEESQTTNLKILEAAYKWKKQKQSSDD 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00251 697 Gene3D Tetratricopeptide repeat domain 122 322 IPR011990 GO:0005515
Phco4g00251 697 Gene3D Tetratricopeptide repeat domain 323 535 IPR011990 GO:0005515
Phco4g00251 697 Pfam HAT (Half-A-TPR) repeat 207 235 IPR003107 GO:0006396
Phco4g00251 697 SMART hat_new_1 239 274 IPR003107 GO:0006396
Phco4g00251 697 SMART hat_new_1 354 388 IPR003107 GO:0006396
Phco4g00251 697 SMART hat_new_1 398 434 IPR003107 GO:0006396
Phco4g00251 697 SMART hat_new_1 276 310 IPR003107 GO:0006396
Phco4g00251 697 SMART hat_new_1 206 237 IPR003107 GO:0006396
Phco4g00251 697 SMART hat_new_1 105 137 IPR003107 GO:0006396
Phco4g00251 697 SMART hat_new_1 436 467 IPR003107 GO:0006396
Phco4g00251 697 SMART hat_new_1 503 537 IPR003107 GO:0006396
Phco4g00251 697 SMART hat_new_1 320 352 IPR003107 GO:0006396
Phco4g00251 697 SMART hat_new_1 539 570 IPR003107 GO:0006396
Phco4g00251 697 SMART hat_new_1 71 103 IPR003107 GO:0006396
Phco4g00251 697 SMART hat_new_1 173 204 IPR003107 GO:0006396
Phco4g00251 697 SMART hat_new_1 469 501 IPR003107 GO:0006396
Phco4g00251 697 SMART hat_new_1 589 622 IPR003107 GO:0006396
Phco4g00251 697 SMART hat_new_1 139 171 IPR003107 GO:0006396
Phco4g00251 697 FunFam Crooked neck pre-mRNA-splicing factor 1 329 481 - -
Phco4g00251 697 Pfam Tetratricopeptide repeat 466 488 IPR019734 GO:0005515
Phco4g00251 697 SUPERFAMILY TPR-like 290 523 IPR011990 GO:0005515
Phco4g00251 697 SUPERFAMILY TPR-like 195 319 IPR011990 GO:0005515
Phco4g00251 697 Gene3D Tetratricopeptide repeat domain 538 670 IPR011990 GO:0005515
Phco4g00251 697 FunFam Cell cycle control protein cwf4 482 680 - -
Phco4g00251 697 Coils Coil 534 554 - -
Phco4g00251 697 MobiDBLite consensus disorder prediction 11 27 - -
Phco4g00251 697 PANTHER PRE-MRNA SPLICING FACTOR 24 693 IPR045075 GO:0000398
Phco4g00251 697 SUPERFAMILY TPR-like 81 205 IPR011990 GO:0005515
Phco4g00251 697 FunFam Cell cycle control protein 121 325 - -
Phco4g00251 697 MobiDBLite consensus disorder prediction 1 35 - -
Phco4g00251 697 SUPERFAMILY TPR-like 526 629 IPR011990 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00251 4 1584103 1590138 Phco4g00251 4 1584103 1590138 ECH