Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00249 ATGGCCTCCGAAGCAAAGCCTGACGGTGAGGCTGCCAAACCTCGTACTCACGAGCTTCTCAGCATCTGCAAGTCTCTCGTCGCCGGTGGAGTCGCTGGAGGAGTGTCACGAAGTGCTGTGGCTCCACTGGAGAGGTTGAAGATTCTGCTGCAGGTTCAAAATTGTCAAAATATAAAATACAACGGAACAAGTCAAGGCTTAAAATATATATGGAAAACTGAGGGTTTTAGAGGATTGTTTAAAGGAAACGGAACTAACTGTGCACGTATTGTCCCCAATTCAGCAGTGAAGTTCTTTAGCTATGAGCAAGCTTTGAAGGGTATTTTATGGTTCTACCAGCAGCAACCTGGAAATGAAGAAGCTCAGCTCACTCCCATTTTGCGTCTTGGAGCTGGAGCTTGTGCGGGTATCATTGCCATGTCTGCCACTTATCCAATGGACATGGTGCGAGGAAGGTTAACCGTCCAGACAGAAGCATCTCCACGTCAATACAGGGGAATTTACCATGCTCTTTCAACAGTCTTCAGGGAAGAAGGCCCTCGAGCTTTGTATAAAGGCTGGCTACCTTCAGTTATAGGAGTTATACCATATGTGGGTCTTAATTTTGCCGTATATGAGTCTCTCAAAGACTGGTTGATTCGATCTAAACCATTTGGATTGGCTCAAGACTCTGAGCTAAGTGTGACAACAAGGCTTGCATGTGGGGCTGCTGCTGGAACTGTTGGCCAAACTGTGGCTTACCCCCTTGATGTCATTCGCCGAAGAATGCAAATGGTGGGATGGAAAGATGCTGCACCAGTTGTCGCTGGTGAGGGGAAGAGCATAATGGAGTATAGTGGCATGGTTGATGCATTCAGGAAAACTGTGCATCACGAGGGATTTGGAGCATTATACAAGGGCTTAGTTCCCAATTCGGTGAAGGTGGTCCCTTCCATAGCTATTGCTTTTGTGTCATACGAGATGGTCAAGGACATTCTTGGAGTAGAAGTGAGAATCTCACATTGA 1005 0.4667 MASEAKPDGEAAKPRTHELLSICKSLVAGGVAGGVSRSAVAPLERLKILLQVQNCQNIKYNGTSQGLKYIWKTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQALKGILWFYQQQPGNEEAQLTPILRLGAGACAGIIAMSATYPMDMVRGRLTVQTEASPRQYRGIYHALSTVFREEGPRALYKGWLPSVIGVIPYVGLNFAVYESLKDWLIRSKPFGLAQDSELSVTTRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWKDAAPVVAGEGKSIMEYSGMVDAFRKTVHHEGFGALYKGLVPNSVKVVPSIAIAFVSYEMVKDILGVEVRISH 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00249 334 PRINTS Mitochondrial carrier protein signature 25 38 IPR002067 GO:0055085
Phco4g00249 334 PRINTS Mitochondrial carrier protein signature 38 52 IPR002067 GO:0055085
Phco4g00249 334 PRINTS Mitochondrial carrier protein signature 138 156 IPR002067 GO:0055085
Phco4g00249 334 PRINTS Mitochondrial carrier protein signature 184 202 IPR002067 GO:0055085
Phco4g00249 334 PRINTS Mitochondrial carrier protein signature 235 257 IPR002067 GO:0055085
Phco4g00249 334 PRINTS Mitochondrial carrier protein signature 82 102 IPR002067 GO:0055085
Phco4g00249 334 ProSiteProfiles Solute carrier (Solcar) repeat profile. 20 107 IPR018108 -
Phco4g00249 334 Pfam Mitochondrial carrier protein 21 106 IPR018108 -
Phco4g00249 334 Pfam Mitochondrial carrier protein 225 326 IPR018108 -
Phco4g00249 334 Pfam Mitochondrial carrier protein 124 214 IPR018108 -
Phco4g00249 334 SUPERFAMILY Mitochondrial carrier 18 321 IPR023395 -
Phco4g00249 334 Gene3D Mitochondrial carrier domain 16 328 IPR023395 -
Phco4g00249 334 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 211 IPR018108 -
Phco4g00249 334 PANTHER SOLUTE CARRIER FAMILY 25 20 328 - -
Phco4g00249 334 ProSiteProfiles Solute carrier (Solcar) repeat profile. 226 325 IPR018108 -
Phco4g00249 334 FunFam Mitochondrial substrate carrier 18 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00249 Phco-Chr4 1570987 1574927 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00249 4 1570987 1574927 Phco4g00249 4 1570987 1574927 ECH