Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00247 ATGGTTTGGGCAGTTTCAGAGCACTTCTTCACTGAAAGAGACATGGCGAAGGAAATGTTGACTCTTGATAATGCCACCACCTGCACATCTTGGAACCTTTCCGGCACCAGACTTGCTACTGCTTCCGCTGATGGCACTCTTTCAATCTTCGATTCCCGCGATCCATCTTCTTCTTCCTCCCTCCGCTCTACATTCAAATTTAGGGTTCTCGAAGGAAACATCGTGAAGATTGTTTGGATTCCGCCAGAGTACGGTGATGCAGTTGCGTGTATTTCCGCCGATGGAATTGTGTCATTGTGGGAGGAGGTTGCAGAAGATTCCCAATCTCTACAGTGGAAGATGTGCAAAAGCTTTGGAAACAGTTCAAGCAAAGTCCTTGATGTTCAATTTGGAATCTCTTTGACTAGTTTGAAAATGGTTGCAGCGTATTCAGATGGCAATGTAAGAGTTTTTGAGCTCCTGAACCCCTTAGAACTGAGAAACTGGCAGCTTCAGGCTGAATTTCAAAATGCTATCGAGTCAGTTTCTGCATTTGGAAAGGCTTCCTGCCTCTCTGCATCCATATCTTGGAATCTGCAAAAGGGTGAAAGCCAGGAATCAAGCTTCCTTATAGGTTTTAATTCAAATACATCAGAGCTTAATTCTTCCAAGGTATGGGAATTTGATCAGGCTCATCAAAGATGGCTTCCGGTAGCAGAATTGGCACTGCCTGAAGACAAGGGTGATCAGGTTTATGCTGCTGCATGGGCACCAAATATTGGCAGACCGTATGAGATCATAGCAGTTGCAACTCACAAGGGACTTGCAATATGGCATCTTGGATTGAACCCTGATCATAATGGAAGACTCCCAGTAGAGAGAGTTGCACTACTCTCAGGTCACGATGGCATGGTGTGGCAAATGGAGTGGGATATGAGTGGAATGACTTTGGCTACTACAGGTCAAGATGGAATGGTCCGATTATGGCAGTCTAATCTCAATGGCGTTTGGCACCAGCAAGCTGCATTTGAACCCACTTCGTAG 1023 0.4545 MVWAVSEHFFTERDMAKEMLTLDNATTCTSWNLSGTRLATASADGTLSIFDSRDPSSSSSLRSTFKFRVLEGNIVKIVWIPPEYGDAVACISADGIVSLWEEVAEDSQSLQWKMCKSFGNSSSKVLDVQFGISLTSLKMVAAYSDGNVRVFELLNPLELRNWQLQAEFQNAIESVSAFGKASCLSASISWNLQKGESQESSFLIGFNSNTSELNSSKVWEFDQAHQRWLPVAELALPEDKGDQVYAAAWAPNIGRPYEIIAVATHKGLAIWHLGLNPDHNGRLPVERVALLSGHDGMVWQMEWDMSGMTLATTGQDGMVRLWQSNLNGVWHQQAAFEPTS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00247 340 PANTHER NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER 21 338 IPR037363 GO:0005198
Phco4g00247 340 Pfam WD domain, G-beta repeat 291 322 IPR001680 GO:0005515
Phco4g00247 340 SUPERFAMILY WD40 repeat-like 23 324 IPR036322 GO:0005515
Phco4g00247 340 ProSiteProfiles Trp-Asp (WD) repeats profile. 291 323 IPR001680 GO:0005515
Phco4g00247 340 FunFam Nucleoporin SEH1 23 338 - -
Phco4g00247 340 Gene3D - 23 337 IPR015943 GO:0005515
Phco4g00247 340 SMART WD40_4 111 152 IPR001680 GO:0005515
Phco4g00247 340 SMART WD40_4 284 323 IPR001680 GO:0005515
Phco4g00247 340 SMART WD40_4 15 51 IPR001680 GO:0005515
Phco4g00247 340 SMART WD40_4 60 101 IPR001680 GO:0005515
Phco4g00247 340 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 291 323 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00247 4 1559826 1564470 Phco4g00247 4 1559826 1564470 ECH