Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00228 ATGGCGAAGCCCGAGAACCGCACGAACCTTGCGTCGTGTTTTGTGGCCACCATTTTCCTGATCTTCATCCTCATCGTGGTCTTCCTGGTTTACTTCACGCTGTTCAAGCCCCAGGACCCCAAAATCGTCGTCAGCGCCGTCCAGATCCCTTCCTTCTCCACCTCCAACGGCACCGCCAACTTCACCTTCTCTCAGTACGCCTCCGTCCGCAACCCTAACCGTGGCACCTTCTCCCACTACGACAGCTCGCTTCAGCTTCTCTACCATGGCACACAGGTCGGCTTCATGTTCGTCCCTGCCGGCAAGATCGCCGCCGGCAGGACTCAGTACATGGCCGCCACGTTCACCGTCCAGTCCTTCCCCTTGGGCCTGGGCCCCCCCACGGTGAATGGGCCCAGCAATGTGGGGCCCACGATGGAAATGGAGTCGAAAATAGAAATGGCTGGGCGCGTGAGGGTGTTGCACCTTTTCAGTCACCACGTGGAGGCCAAAGCTGAGTGCAGGGTCCTCGTCGCTCTCATCGATGGATCCGTGTTAGGTTTTCGTTGCTAA 552 0.5851 MAKPENRTNLASCFVATIFLIFILIVVFLVYFTLFKPQDPKIVVSAVQIPSFSTSNGTANFTFSQYASVRNPNRGTFSHYDSSLQLLYHGTQVGFMFVPAGKIAAGRTQYMAATFTVQSFPLGLGPPTVNGPSNVGPTMEMESKIEMAGRVRVLHLFSHHVEAKAECRVLVALIDGSVLGFRC 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00228 183 Pfam Late embryogenesis abundant protein 68 167 IPR004864 -
Phco4g00228 183 SUPERFAMILY LEA14-like 20 123 - -
Phco4g00228 183 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00228 Phco-Chr4 1431381 1431932 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00228 4 1431381 1431932 Phco4g00228 4 1431381 1431932 ECH
Phco4g00228 4 1431381 1431932 Phco4g03395 4 54279154 54280062 PCT