Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00226 ATGAGTATGAATGGTATTGTGTACTTTTTAGTATCTACTGTAATACTATCTTCCACCTTTGTAGAATCAAGAACACTCTCACCATTCCGACAACAACTCACTCTCAGCCCCTCAACTGCACCTTCTTCTTCTCCTCTGGTGCCGGCGTTGTTCGTCATCGGAGACTCCTCCGTTGATTGCGGAACCAACAATTTTCTTGCAACCTTCGCACGTGCAGATCACCTTCCTTACGGAAGAGATTTCGACACCCACCAACCCACCGGAAGATTCTCCAACGGAAGGATCCCTGTTGATTATCTTGCTCTGCGTGTAGGGCTTCCCTTTGTGCCAAGCTATCTTGGACAGACAGGGGCAGTGGATGATATGATTCATGGGGTAAATTATGCTTCTGCTGGCGCTGGCATCATTCTTTCTAGTGGCTCTGAATTGGGTCAGCATATCTCCCTCACTCAGCAAATTCAGCAATTTACAGACACGCTTCAGCAGTTCATTTTGAGCATGGGCGAGGATGCTGCAACCAATCTCATATCCAATTCTGTCTTTTATATTTCTATTGGAATCAACGACTACATTCATTACTATTTGCTCAATGTATCCAACGTCGATAATTTGTTTCTACCCTGGCATTTCAACCACTTTTTGGCATCTTCACTCCAGCAAGAGATCAAGAACTTGTACAACTTAAATGTTAGGAAAGTGGTGATCACGGGACTTGCCCCAATTGGCTGTGCCCCTCACTACCTGTGGCAGTACGGTAATGAAGATGGAGAATGTGTTGAGCAAATAAATGACATGGCTGTTGAGTTTAACTTCCTCACGAGGTACATGGTTGAGAATCTTGCTGCGGAGCTGCCCGACGCCAATATCATCTTCTGTGACGTGTTTGAAGGTTCCATGGATATTTTAAAGAATCACGAACGTTATGGCTTTAACGTCACAACCGAGGCCTGCTGTGGAATGGGGAAGTACAAGGGCTGGATCATGTGCTTATCACCGGAAATGGCGTGCAGTAACTCCTCCAGCCATATCTGGTGGGATCAGTTTCATCCAACTGATGCAGTGAATGCTATTCTGGCAGACAATATATGGAATGGCCGGCACACTAAAATGTGCTACCCTAAGAACTTGGAGGACATGGTTATTAAGATGGCAAAATGA 1158 0.4525 MSMNGIVYFLVSTVILSSTFVESRTLSPFRQQLTLSPSTAPSSSPLVPALFVIGDSSVDCGTNNFLATFARADHLPYGRDFDTHQPTGRFSNGRIPVDYLALRVGLPFVPSYLGQTGAVDDMIHGVNYASAGAGIILSSGSELGQHISLTQQIQQFTDTLQQFILSMGEDAATNLISNSVFYISIGINDYIHYYLLNVSNVDNLFLPWHFNHFLASSLQQEIKNLYNLNVRKVVITGLAPIGCAPHYLWQYGNEDGECVEQINDMAVEFNFLTRYMVENLAAELPDANIIFCDVFEGSMDILKNHERYGFNVTTEACCGMGKYKGWIMCLSPEMACSNSSSHIWWDQFHPTDAVNAILADNIWNGRHTKMCYPKNLEDMVIKMAK 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00226 385 CDD SGNH_plant_lipase_like 48 366 IPR035669 -
Phco4g00226 385 Gene3D SGNH hydrolase 39 368 IPR036514 -
Phco4g00226 385 Pfam GDSL-like Lipase/Acylhydrolase 50 361 IPR001087 GO:0016788
Phco4g00226 385 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 48 377 - -
Phco4g00226 385 SUPERFAMILY SGNH hydrolase 121 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00226 Phco-Chr4 1422042 1424020 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00226 4 1422042 1424020 Phco4g00226 4 1422042 1424020 ECH