Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00225 ATGTCAAGGCATCAATGCCCTACCACCATTTTTGGCCTCTCTTTCTCTTTCATTTTCTCCTTGTGGTGCCTCCTCTTCTTCTACATCAAGCTTCGCCTCGTTCATGGCACCGGAGGAGGTAAAGCTGTGTTAGAGTTCAATGAATCAGTTAGCACCAACAATATTAGTCAGAAACTTGCAAAACCCTTGTACTCACTTCCTGAAACAACTAGTATAGAACAAGTGTTTTGGCACGTCTTAGGAAATGGTAGTAATTTGGTGTGCAAGTTGCATCCTCCGCAGGAGGAAAATAAACTGCAACAAATTCCTGATGGGAAACTCCAGCCCAATTACGATGAACTCCGAAACATGACAGAAGAACAAGAAAAAATAAAGGGCATGGACTCAGCGCTTGTTAACATAACTCACAGGCTAGAATCTGATGGCTCTGTGTACAACTATGCCTCCGAGTCCAAAGGTGCAAAGGTGGTGGCCCATAATAAGGAGGCCAAAGGTGCAACGAATATACTCGGGAAGGATCATGATAAGTACCTGAGAAACCCTTGCTCTGTTGAAGGGAAATTTGTTGTTATTGAGCTTTCAGAAGAGACCCTGGTTGATTCTGTGAAGATCGCAAACTTTGAGCATTATTCTTCCAACTTCAAGGAGTTTGATTTGGCTGGAAGTTTGAGCTATCCAACTGAGGAATGGAGCGTTCTGGGAAGATTTGTTGCTTCCAATGTCAAACATGCACAGGTCTTTAAACTGTCTGAGCCCAAGTGGGTAAGGTATTTAAAGTTGACCTTGCTTAGTCATTATGGATCTGAGTTTTACTGCACACTGAGTGTTGTAGAAGTTTATGGGATCAATGCAATAGAGCGGATGCTTAAGGATCTAATTGTGGCTTCTGTGGGCTACATTCCTGATAAGCCACCTGAGGATAATATCAGTGAGACCCCATCTTTGAAATCAGAAGATGGTCAAAATGATAAAAATGGAAAAAAAGTTGATACTAAGAATGATACTGTGGCTGCTCAGATATCAAGCAATGATACCACTAGAGAGTATGACGCAGAAGCGGTAAAAACAACAATGACTGCCAACTTGATTCCAGATTCTGTCTTAGAACTTAGACAACAGCTGAATGGTAGGGTAGCAGGTGACACTGTTCTGAAGATTTTGATGAAGAAAGTGAGGTCAGTAGAGGTAAACTTATCAGCCCTTGAGGATTTCCTCAAAGAATTGAATAGAAAACAAGGAGCTAAAATACCGGATCTTGAGAAAGAGTTGTCCAGACTATCAGAAAGTCTTGGACAAAGCAAGTCAGAGATTAAAGATCTCTGGCACTGGAACACAAATTTGGAAAAAGGAATATCTGAGGTTGAGTCTTGGAAAGATGCTGTCTCATCTCAGCTTAACGAATTAGCCAGAGAAAACAGCATGCTAAGATCAGATGTTCAAAAGATTGCAAGTAATCAAGCAAATCTGGAAACCAAAGAACTTGCTGTCTTAGCAACGAGTCTTATTTTTGTGTGCCTTGCAGTTCTCAAGATTGTTTCGGTATACATGTTGACATTTTTTGCATCATATAATACAAATAAGGTGCCCCAGACAATTAGAGGATGGGTTACATTATTTGTATGCTGTAGTGTAACAATATTCATTATCTTGTTTAATAGCTAG 1662 0.4055 MSRHQCPTTIFGLSFSFIFSLWCLLFFYIKLRLVHGTGGGKAVLEFNESVSTNNISQKLAKPLYSLPETTSIEQVFWHVLGNGSNLVCKLHPPQEENKLQQIPDGKLQPNYDELRNMTEEQEKIKGMDSALVNITHRLESDGSVYNYASESKGAKVVAHNKEAKGATNILGKDHDKYLRNPCSVEGKFVVIELSEETLVDSVKIANFEHYSSNFKEFDLAGSLSYPTEEWSVLGRFVASNVKHAQVFKLSEPKWVRYLKLTLLSHYGSEFYCTLSVVEVYGINAIERMLKDLIVASVGYIPDKPPEDNISETPSLKSEDGQNDKNGKKVDTKNDTVAAQISSNDTTREYDAEAVKTTMTANLIPDSVLELRQQLNGRVAGDTVLKILMKKVRSVEVNLSALEDFLKELNRKQGAKIPDLEKELSRLSESLGQSKSEIKDLWHWNTNLEKGISEVESWKDAVSSQLNELARENSMLRSDVQKIASNQANLETKELAVLATSLIFVCLAVLKIVSVYMLTFFASYNTNKVPQTIRGWVTLFVCCSVTIFIILFNS 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00225 553 Coils Coil 465 485 - -
Phco4g00225 553 MobiDBLite consensus disorder prediction 317 331 - -
Phco4g00225 553 Gene3D - 160 292 - -
Phco4g00225 553 SUPERFAMILY Galactose-binding domain-like 183 280 IPR008979 -
Phco4g00225 553 MobiDBLite consensus disorder prediction 304 338 - -
Phco4g00225 553 Coils Coil 391 411 - -
Phco4g00225 553 ProSiteProfiles SUN domain profile. 124 284 IPR012919 -
Phco4g00225 553 PANTHER MEMBRANE PROTEIN CH1 RELATED 92 513 IPR045120 GO:0016020
Phco4g00225 553 Pfam Sad1 / UNC-like C-terminal 159 281 IPR012919 -
Phco4g00225 553 Coils Coil 416 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00225 Phco-Chr4 1418931 1421583 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00225 4 1418931 1421583 Phco4g00225 4 1418931 1421583 ECH