Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00040 ATGAGAGGTGGAGAGGAGAGACAGACGGCGACGGGGATTCGGAAGAAGGGAAGCGGAGTGAGGCAATGGTTGGTGCTCGACGGAAAAGGGGAGACGGAGGTGGTGGAGGCCGGGAAGCACGCCATCATGAGGCGCACCGGCCTCCCTGCTCGTGACCTCCGTATATTGGACCCACTCCTCTCCTACCCTTCCACCCTTCTCGGCCGTGAGAGAGCCATCGTCATCAACTTAGAGCATATCAAGGCCATCATCACTGCCCAACAGGTCTTACTTCTCAACTCACGTGACCCTTCCGTCACCCCCTTTGTCCACGAGCTACAAGCCAGGATCCTCCGTCACCACCAGGCCTCCACTTCTTCCAAACACCACGCTCACCACGACTCCGACCGCGACCACGACCGCGACCACGACCCCGACCCTGACGCCATCAAGATTCTCCCCTTCGAGTTCGTAGCCCTTGAGGCCTGCCTTGAAGCCGCATGTAGCGTATTGGAGAACGAGGCAAAAACTTTGGAGCAGGAGGCTCATCCCGCCTTGGACAAGCTCACTTCCAAGATCAGTACCCTCAATTTGGAACGCGTTCGACAAATCAAGAGCCGATTAGTCGCCATCACTGGACGTGTTCAGAAGGTGAGGGATGAATTGGAGCACTTGCTGGACGACGATGAAGATATGGCTGAGATGTATCTGACAGACAAGTTAGCCGAACAGCAGTTGGAACAAAGCTCTTCCGGATCCTCCATAAATGACCAAGACGAGGAGGATTTAGGCGACAGGACCGCTCCAGAAATATCCTTTGATGCTGGGGGACCCGCCGTGGGTTTCGAGGATCATCGGAATGCTTACAATGTTCTTGGCAGGGACAGTCATGGAACCCGCGGTAGCACCTACAGTGCCGTCACCAAGCAACTTGATGTAGAGGAGCTTGAAATGCTTTTGGAGGCTTACTTTGTGCAGATCGATGGCACCTTGAACAAGCTCTCGACGCTGAGGGAATATGTTGATGACACGGAGGATTACATCAACATCATGCTTGATGACAAACAGAACCATCTCCTCCAAATGGGAGTCATGTTGACCACAGCAACCCTGGTAGTGAGTGCCTTTGTTGTTGTGGCTGGAGTTTTCGGCATGAATATTCACATTGAGCTTTTTGATCCCGATAAAGCTGGGATGCCAGAATTCCTCTGGACTGTTGGTGGTAGCACTGCAGGGACCATATTCTTGTATGTAGTTGCCATTGCCTGGTGTAAGCACAAACGCTTGCTGGAGTAA 1275 0.5318 MRGGEERQTATGIRKKGSGVRQWLVLDGKGETEVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTLLGRERAIVINLEHIKAIITAQQVLLLNSRDPSVTPFVHELQARILRHHQASTSSKHHAHHDSDRDHDRDHDPDPDAIKILPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTDKLAEQQLEQSSSGSSINDQDEEDLGDRTAPEISFDAGGPAVGFEDHRNAYNVLGRDSHGTRGSTYSAVTKQLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGVFGMNIHIELFDPDKAGMPEFLWTVGGSTAGTIFLYVVAIAWCKHKRLLE 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00040 424 MobiDBLite consensus disorder prediction 239 263 - -
Phco4g00040 424 MobiDBLite consensus disorder prediction 114 139 - -
Phco4g00040 424 FunFam Magnesium transporter MRS2-1 11 94 - -
Phco4g00040 424 Gene3D - 9 94 - -
Phco4g00040 424 Coils Coil 419 424 - -
Phco4g00040 424 MobiDBLite consensus disorder prediction 121 139 - -
Phco4g00040 424 Pfam CorA-like Mg2+ transporter protein 308 414 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Phco4g00040 424 Gene3D Magnesium transport protein CorA, transmembrane region 97 352 - -
Phco4g00040 424 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 10 423 IPR039204 -
Phco4g00040 424 Coils Coil 154 174 - -
Phco4g00040 424 CDD Mrs2_Mfm1p-like 23 422 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00040 Phco-Chr4 268659 271726 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00040 4 268659 271726 Phco4g00040 4 268659 271726 ECH