Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00030 ATGGCTTCCTCTTCTTCTGCGACGGAAGGTTTAGGGTTATCGGAAGAAGATTACGAGGTGATGTATGGGTCTGAATCGGGATGGGTGGAGGCTCGATCATCATGCGATCATCTACCCTCTTTATCCGCCGATCTCAGCCACATTCCGCCTCCCAACACACCCTGCCACACCTGCCAACACCCCTCCGAAAACTGGCTCTGTCTCTCTTGTAAGCAGGTCCTCTGTAGCCGTTTCGTCAACAAGCACATGCTCCATCACTTCACCCACACTAATCACTCTATCGCCCTCAGTTTCAGTGATCTCTCCGTCTGGTGTTTCTCTTGCGACGCTTACTTGGACGCTCAACTCATTCCCCAACTCCGTCCTGTCCATCAACTAGCTTACATAATGAAATTCGCTGAGCCTCCACCACTCCCACTTATTCAACATCAACCTTCCTCTGCCACTTCGGACTAG 456 0.5132 MASSSSATEGLGLSEEDYEVMYGSESGWVEARSSCDHLPSLSADLSHIPPPNTPCHTCQHPSENWLCLSCKQVLCSRFVNKHMLHHFTHTNHSIALSFSDLSVWCFSCDAYLDAQLIPQLRPVHQLAYIMKFAEPPPLPLIQHQPSSATSD 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00030 151 Pfam Zn-finger in ubiquitin-hydrolases and other protein 55 113 IPR001607 GO:0008270
Phco4g00030 151 SMART Zf_UBP_1 54 103 IPR001607 GO:0008270
Phco4g00030 151 ProSiteProfiles Zinc finger UBP-type profile. 33 134 IPR001607 GO:0008270
Phco4g00030 151 SUPERFAMILY RING/U-box 33 123 - -
Phco4g00030 151 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 29 135 IPR013083 -
Phco4g00030 151 PANTHER HISTONE DEACETYLASE-LIKE PROTEIN 3 149 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00030 4 215580 216200 Phco4g00030 4 215580 216200 ECH