Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco4g00015 | ATGTCGATTTCGGGCATCCAGGGTCAGCCTCTTGAGGTTACGGTGGTGTCCTGCTCCAAGCTGAAGGACACAGAATGGATTTCAAGGCAAGATCCCTACGTTTGTGTTGAGTATGGCAGCACCAAGTTCCGAACCAGAACCTGCACAGACGGCGGTAAAAACCCCGTCTTCCAGGAGAAGTTCGTCTTTCCCCTCATCGAAGGCCTTCGGGAGATCAACGTCCTTGTTTGGAACAGCAACACTCTCACCTTCGACGATTTCATCGGAAGCGGAAAGATTCAGCTCCACAAGGTTCTCTCTCAAGGCTTCGATGACTCTGCTTGGCCCCTTCAGACCAAATCTGGCAGACATTCTGGTGAAGTAAAAGTCATACTGCATTACGCAATTGCAAATCAAAGGCAGAAATCAGGCTCAAGCCACGCTCCATCTGCACCTCCCTATGTGTCAACACCAACTCCTCCTTACCCTTCTTATTCTAATCCTTCTACTACTTCCTACCTCCCTCCTTCTACTTCCTCCTATCCACCACGTTCCTATCCAACTCCTTACCATACAACTGGATCATACCCACCGGTAGCATCCACAGCCTCATACCCACCGCCTCCCACACCTTACTCACCATATCCCTCACATTCATCTCCCTATCCACAGCCCTCATACCCTGCATCATCTACCTATCCACCCTCCTCATTTCCTCCTCCCCCCTCCTATCCGCCTGCTTCAGCTTATCCACCACCTTCGTATCCACCGCCTGCAGGAATATACCCTCCACCGCCATACTGA | 783 | 0.5121 | MSISGIQGQPLEVTVVSCSKLKDTEWISRQDPYVCVEYGSTKFRTRTCTDGGKNPVFQEKFVFPLIEGLREINVLVWNSNTLTFDDFIGSGKIQLHKVLSQGFDDSAWPLQTKSGRHSGEVKVILHYAIANQRQKSGSSHAPSAPPYVSTPTPPYPSYSNPSTTSYLPPSTSSYPPRSYPTPYHTTGSYPPVASTASYPPPPTPYSPYPSHSSPYPQPSYPASSTYPPSSFPPPPSYPPASAYPPPSYPPPAGIYPPPPY | 260 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco4g00015 | 260 | CDD | C2 | 11 | 108 | - | - | |
| Phco4g00015 | 260 | ProSiteProfiles | C2 domain profile. | 1 | 109 | IPR000008 | - | |
| Phco4g00015 | 260 | SMART | C2_3c | 10 | 107 | IPR000008 | - | |
| Phco4g00015 | 260 | Gene3D | C2 domain | 9 | 128 | IPR035892 | - | |
| Phco4g00015 | 260 | MobiDBLite | consensus disorder prediction | 194 | 236 | - | - | |
| Phco4g00015 | 260 | Pfam | C2 domain | 11 | 101 | IPR000008 | - | |
| Phco4g00015 | 260 | MobiDBLite | consensus disorder prediction | 159 | 193 | - | - | |
| Phco4g00015 | 260 | PANTHER | CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790) | 4 | 260 | - | - | |
| Phco4g00015 | 260 | MobiDBLite | consensus disorder prediction | 134 | 236 | - | - | |
| Phco4g00015 | 260 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 9 | 127 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco4g00015 | Phco-Chr4 | 134505 | 135732 | Transposed |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco4g00015 | 4 | 134505 | 135732 | Phco4g00015 | 4 | 134505 | 135732 | ECH |