Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g03296 ATGGAGACGAGCATGAGGGCGCCTTTTCACGTTCTTGCTATTTTTCTTCTCCTATCAGACCCTTTTGCTGTTGTAAATGCAAACTCTGAAGGTGATGCACTGTTCGCGTTCAGAAGAGCTGTGAAAGACCCAAGTAACGTTCTACAGAGCTGGGATCCAACCTTGGTGGATCCTTGTACATGGTTCCATGTTACCTGTGATGATGATAAGAGAGTTACCCGACTGGACCTCGGACACGCAAAACTTTCGGGTCATTTGGTTCCAGAGCTAGGGAGGCTCCAGCGCCTTCAGTTTCTAGAACTGTACAAGAATGATTTGAAGGGTCCAATACCAAAGGAACTTGGAGACCTCAAGAACCTGGTTAGCCTGGGTCTCTACCAGAATAACCTCACTGGCTCCATCCCCGCCAGCCTGTCCAACCTCTCCAACATCAAATTCCTGCGGCTCAATAGCAACATGCTCACTGGAAGAATACCGAGGGAACTCACTAAGTTGGGAAACCTCAAGATCTTAGACCTATCAAACAACGATCTGTGTGGTACTTTCCCGACATCCGGCTCCTTTTCCAAGTTATCTGAACAAAGTTTCAAGAATAATACACGACTTAAAGGACCAGAATTAATGGGATTCGTCAGATATGATACTGGAGAAAGCTGCAAATGA 663 0.463 METSMRAPFHVLAIFLLLSDPFAVVNANSEGDALFAFRRAVKDPSNVLQSWDPTLVDPCTWFHVTCDDDKRVTRLDLGHAKLSGHLVPELGRLQRLQFLELYKNDLKGPIPKELGDLKNLVSLGLYQNNLTGSIPASLSNLSNIKFLRLNSNMLTGRIPRELTKLGNLKILDLSNNDLCGTFPTSGSFSKLSEQSFKNNTRLKGPELMGFVRYDTGESCK 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g03296 220 FunFam Somatic embryogenesis receptor kinase 1 26 212 - -
Phco3g03296 220 SUPERFAMILY L domain-like 29 203 - -
Phco3g03296 220 Pfam Leucine Rich Repeat 167 189 IPR001611 GO:0005515
Phco3g03296 220 Gene3D Ribonuclease Inhibitor 26 209 IPR032675 -
Phco3g03296 220 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Phco3g03296 220 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 11 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g03296 Phco-Chr3 58592501 58594142 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g03296 3 58592501 58594142 Phco3g03296 3 58592501 58594142 ECH