Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g03295 ATGAAGAACTCTCTGAAGAAATTGCGAGGTCTGGCGCTTCAGAATCATAACCACAATCGCAGTCACAAGCATGGCTCCTCCAACTCCATCCAGCCTCTGGGCCAGCTTGACGAGCTCGCTCGGGCCACCCAGGATATGCAAGACATGAGGGACTGCTATGACACCTTGCTTTCCGCCGCAGCCGCCACCGCCAGCAGTGCCTATGAATTCTCCGAGTCCTTGCGGGACATGGGCTCTTGTCTTCTCGAGAAGACCGCTTTGAATGATCACGGAGATGAAACTGGAACGCTTCTCCTCATGCTTGGCAAAATCCAGTTCCAACTCCACAAACTCATTGATGACTACCGTTCCCATATAATCCAGACAATTACCATTCCCTCAGAGTCTCTCTTGAATGAACTTCGAATTGTTGAGGAGATGAAGCGGCAATGTGATGAGAAAAGAGACTTATATGACTATATGGTAGCAAGATACAGAGAAGGAGGCAGGTCTAAAGGCGGGAAAGGAGAAACTTTTTCTTTGCAGCAGTTGCAAACTGCTCGTGATGAATATGATGAAGATGCTACTTTGTTTATTTTCCGATTGAAATCTCTGAAGCAAGGACAATCACGTAGTCTTCTAACACAGGCAGCGCGTCACCATGCTTCTCAGTTGTGTTTCTTCAAGAAATCAGTCAAGTCCCTTGAGACAGTAGAACCACATTTAAAATCTGTAACTGAACAGCAGCACATTGATTACCAGTTCAGTGGTCTTGAAGAGGAGGATGGGTTTGAAGGTGACTATGGAGATGATGATGATGGTGGTGGTTATGATGACAATGATGATGGTGAGCTGAGTTTTGATTATGGACAAACTGAACAAGATCAAGATGTTTCTACATCACGAAACTCCATGGAGCTGGATCAGGTGGAACTTACACCTCCTGGAGGTTTTACAGCTGAAGCTGCTAAGGAAAACTTAGACAAACTTCAAAGGAATTTGTTTTCCTTTAGGGTTAGGACAGGGAGCCAATCTGCCCCGCTTTTTGCTGATAATAAACCTGATGCAAGTGAAAAACTGAGACAGATGCGCCCATCTTTATCACGGAAGTTTAGTTCATATGTGCTACCCACACCCGTTGGTGCTAAGAGTTCAATCTCTTCAAGTTCAAATAATCCAAAACCTTCCAAAGTGCAGGAAAATTTAAGTGAACCTACAAAGAACTTGTGGCATTCATCCCCATTGGAACAAAAGAAACATGAAAAAGATATCGGTGATGAATTTTCTGGTTCTACTGTCAGAAGTGCTCAGTCAGTACTCAAGGAAAGTAACAGCAATACTGCCTCCACGAGATTGCCTCTTCCTCTGGGAGATTATCTTTTATCCTCAAACCGTGATTACATTTCTGCTCATTCCAAAAAGATTAAAAGACATGCCTTTTCTGGTCCATTGACAAGTAATCCCGGTCCTACCAAGCCTGTTTTGGTTGAAAGTGTTCAACTGTTCTCTGGACCTCTTTTGCATGGTCCAATCCCTAAGCCTCGGTCATCATCTCCAAAAGTATCTCCCACTGCTTCTCCCACTCTTATGTCTTCACCCAAAATAAGTGAGCTCCATGAACTTCCTAGGCCTCCAACCAGCTTCCCATCCAATTCAAGGCTTTTAGGTTTGGTGGGTCATTCTGGTCCATTGGTGTCTAGAGGTCAAAAGGTTTCCTCTGCAAATAATTTGGTTGCATCAAGTGCTGCATCTCCATTGCCAATGCCACCTCAGGCCATGGCTCGTAGTTTCTCCATACCTTCTAGTGGCGCTAGAGTTGCAGCATTACATGTGCCTAGAACACTAGATTCTTCTCATAGATCATCTATATCTGAGACTGTTGCTTCTCATCTGATGCCACAAACATTATCTAGTAGTCCGCCATCATCAGATTGCTGA 1917 0.4444 MKNSLKKLRGLALQNHNHNRSHKHGSSNSIQPLGQLDELARATQDMQDMRDCYDTLLSAAAATASSAYEFSESLRDMGSCLLEKTALNDHGDETGTLLLMLGKIQFQLHKLIDDYRSHIIQTITIPSESLLNELRIVEEMKRQCDEKRDLYDYMVARYREGGRSKGGKGETFSLQQLQTARDEYDEDATLFIFRLKSLKQGQSRSLLTQAARHHASQLCFFKKSVKSLETVEPHLKSVTEQQHIDYQFSGLEEEDGFEGDYGDDDDGGGYDDNDDGELSFDYGQTEQDQDVSTSRNSMELDQVELTPPGGFTAEAAKENLDKLQRNLFSFRVRTGSQSAPLFADNKPDASEKLRQMRPSLSRKFSSYVLPTPVGAKSSISSSSNNPKPSKVQENLSEPTKNLWHSSPLEQKKHEKDIGDEFSGSTVRSAQSVLKESNSNTASTRLPLPLGDYLLSSNRDYISAHSKKIKRHAFSGPLTSNPGPTKPVLVESVQLFSGPLLHGPIPKPRSSSPKVSPTASPTLMSSPKISELHELPRPPTSFPSNSRLLGLVGHSGPLVSRGQKVSSANNLVASSAASPLPMPPQAMARSFSIPSSGARVAALHVPRTLDSSHRSSISETVASHLMPQTLSSSPPSSDC 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g03295 638 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 636 IPR037488 -
Phco3g03295 638 MobiDBLite consensus disorder prediction 500 526 - -
Phco3g03295 638 MobiDBLite consensus disorder prediction 282 301 - -
Phco3g03295 638 MobiDBLite consensus disorder prediction 406 421 - -
Phco3g03295 638 Gene3D Arfaptin homology (AH) domain/BAR domain 35 254 IPR027267 -
Phco3g03295 638 CDD BAR 68 234 - -
Phco3g03295 638 MobiDBLite consensus disorder prediction 252 281 - -
Phco3g03295 638 SUPERFAMILY BAR/IMD domain-like 38 237 IPR027267 -
Phco3g03295 638 MobiDBLite consensus disorder prediction 374 447 - -
Phco3g03295 638 MobiDBLite consensus disorder prediction 338 357 - -
Phco3g03295 638 Coils Coil 313 333 - -
Phco3g03295 638 MobiDBLite consensus disorder prediction 423 445 - -
Phco3g03295 638 MobiDBLite consensus disorder prediction 511 526 - -
Phco3g03295 638 MobiDBLite consensus disorder prediction 252 311 - -
Phco3g03295 638 MobiDBLite consensus disorder prediction 374 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g03295 Phco-Chr3 58586869 58590259 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g03295 3 58586869 58590259 Phco3g03295 3 58586869 58590259 ECH