Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02819 ATGAAACTCAGCATAAAGCTATCGTTTTACTACCCACCTCGCTTTTGCACTAATCTATTTCGCCGACAAGCACTGTCAGCTAAAACATCTAACCAGAGAGAACAAAATGAAAGATTTGTTGACCCTGCTCCTACTTTTTCCCTTTTGAGATTGAGTCACTTGACAAGTATGTATACTGACGGTTACATTGCTCTAGTTACTAACTTATCTCCAAGAGCAACAGAGAATGATGTACACAATTTTTTTGCTTATTGTGGTCCAATTGAGCATGTTGAAATAATAAGATCTGGTGAAAATGCATCTACTGCATATGTGACTTATCGGGATGCTTATGCCCTGGAAACTGCACTATTGCTAAATGGATCAATGATATTGGACCAATGTATATTCATTTCACGCTATGAAGCTTACGTAAATGACTATGATAATTGGGGCAGTCATGTATCAAAGCCTGAAGACAGTATTACGACCTCACAAGGTGATCACATGGATAAGTTTGTTTCTTCCCCAGGAGAAGCACTAACTCTGGCTCAGGTGGTTGTCAAAACAATGGTGGCTAAGGGATATGTGTTGGGCAAAGATGCATTTGTCATGGCAAAAGCTTTTGATGAATCTCATAATGTGTCATCTATAGCATCATCGAAGGTTGCTGAACTCAGCAATAAAATTGGGTTGACTGATACCATTAATTCAGGCATTGAAACTTTTAAATCTGTGGATGAGAAGTATCATGTCACAGACTTCACCAAATCAGCTGCAACAGTGACAGGGACAACAGCTATAGTTGTGGCATCAGTTACCGGTAAAGCTGCTGTGGCAGCTGGAAATGCTATAACCAACAGTAGCTACTTTGCCAAAGGTGCTCTTTGGGTTTCAGATATGTTGACACGTGCAGCCAAAGCAGCTGCTGATTTGGGTCAGCGGGAAAAAAAATGA 936 0.4038 MKLSIKLSFYYPPRFCTNLFRRQALSAKTSNQREQNERFVDPAPTFSLLRLSHLTSMYTDGYIALVTNLSPRATENDVHNFFAYCGPIEHVEIIRSGENASTAYVTYRDAYALETALLLNGSMILDQCIFISRYEAYVNDYDNWGSHVSKPEDSITTSQGDHMDKFVSSPGEALTLAQVVVKTMVAKGYVLGKDAFVMAKAFDESHNVSSIASSKVAELSNKIGLTDTINSGIETFKSVDEKYHVTDFTKSAATVTGTTAIVVASVTGKAAVAAGNAITNSSYFAKGALWVSDMLTRAAKAAADLGQREKK 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02819 311 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 66 128 IPR000504 GO:0003723
Phco3g02819 311 SUPERFAMILY RNA-binding domain, RBD 60 135 IPR035979 GO:0003676
Phco3g02819 311 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 62 136 IPR000504 GO:0003723
Phco3g02819 311 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 66 309 - -
Phco3g02819 311 Gene3D - 21 138 IPR012677 -
Phco3g02819 311 SMART rrm1_1 63 132 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02819 Phco-Chr3 54570438 54574559 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02819 3 54570438 54574559 Phco3g02819 3 54570438 54574559 ECH