Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02805 ATGGCACTACCTAAATACAGCATGCACTTGGATCTTTGTTTAATGTTATTATATGTCCATGCACTAGAGGTCTTTGCAGCAAACTCTGATGGAGCAAGGCACCAATCACAAGACTGGTTAAACCATGGTGGAGATTTGTTCAACAGAAGATATGCTTACAAGGAGCGTAAGATCAGCACCAAAACTGCACCAGACCTACGTATGAAATGGAAATTCTATGCTGGGAGAGACATCACTGCAACACCAGCCATATATGATGGTACCCTTTATTTTCCAAGCTGGAATGGTAACATCTATGCCGTTAAAGAAGCTGATGGATCGCTTGTTTGGAAGCAGAACTTGGAGAAATTGACAGGTCTGAAAGCATCTGATGGCCTTGTTGAGAATGTAAATTGGACAGTGTCACGCTCAACTCCCACAGTGGCCGGGGATTTACTGATGATTGGAGTCTATAGTCCTGCTGCTGTTGTTGCTGTCAAAAGAACAACAGATAACCACTCCAACTCAATCTTAGCCCTTGATTTGGATTCTGGGAAGATCAGATGGTACCGCCAGTTTGGCGGCTACGATGTATCTGTCTTAGTATGTAGCGGTTCTTCCAGACCTAGTCCTAATTGTCCTCCTCAAGCAGACAAACCAGATGTTGATTTTGGTGAGGCACCAATGATGTTGACCGTATATATAAATCGAATCAAGAAAGATATTGTTGTTGCAGTCCAGAAAAGTGGCATTGCATGGGCTTTGGATCGCAATAATGGCCACCTCGTTTGGTATACGGAAGCTGGGCCATACGGGCTCGCAGGAGGTGGATCATGGGGTGCAGCAACTGATGAAAAGAGGGTTTACACGAACATTGTGAATTCTGATGCCAACAATTTCACTCTCGCACCCTCAAATGAGATCACAACTGCTGGTGGGTGGGTGGCAATGGATGCTCACAATGGTAGAGTTCTATGGTCAACAGCAAACCCTAGTAACAGCACTGCTTACGGTCCTGTTAGTGTTGCAAATGATGTTGTCTTTGCTGGATCCGCTGATAGAATGGGATACATATATGCAATTGATGCCAAGAGTGGAAAAATTTTATGGTCCTACAAAACTGGAGCCAGTGTCTATGGAGGCATGTCAATCTCCAGAGGATGCATATATGTGGGCCATGGATACAATGTTGCTTATGGACATACCTTGAACTTAACAGATGGAACCTTTCTCTTTGCCTTCTGTGTCTAA 1230 0.4423 MALPKYSMHLDLCLMLLYVHALEVFAANSDGARHQSQDWLNHGGDLFNRRYAYKERKISTKTAPDLRMKWKFYAGRDITATPAIYDGTLYFPSWNGNIYAVKEADGSLVWKQNLEKLTGLKASDGLVENVNWTVSRSTPTVAGDLLMIGVYSPAAVVAVKRTTDNHSNSILALDLDSGKIRWYRQFGGYDVSVLVCSGSSRPSPNCPPQADKPDVDFGEAPMMLTVYINRIKKDIVVAVQKSGIAWALDRNNGHLVWYTEAGPYGLAGGGSWGAATDEKRVYTNIVNSDANNFTLAPSNEITTAGGWVAMDAHNGRVLWSTANPSNSTAYGPVSVANDVVFAGSADRMGYIYAIDAKSGKILWSYKTGASVYGGMSISRGCIYVGHGYNVAYGHTLNLTDGTFLFAFCV 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02805 409 Gene3D - 22 163 - -
Phco3g02805 409 SMART ire1_9 82 113 IPR018391 -
Phco3g02805 409 SMART ire1_9 332 366 IPR018391 -
Phco3g02805 409 SMART ire1_9 229 260 IPR018391 -
Phco3g02805 409 SMART ire1_9 286 322 IPR018391 -
Phco3g02805 409 SMART ire1_9 139 185 IPR018391 -
Phco3g02805 409 PANTHER QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) 163 409 - -
Phco3g02805 409 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 35 373 IPR011047 -
Phco3g02805 409 Pfam PQQ-like domain 77 365 IPR002372 -
Phco3g02805 409 Gene3D - 165 407 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02805 Phco-Chr3 54454266 54456305 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02805 3 54454266 54456305 Phco3g02805 3 54454266 54456305 ECH