Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02697 ATGTGTGCATTGTACGCCATCTGGACATCCATTTTGCATCTGCATCCTCCTTCTTTGGTTTATTTGCTTTGGCGTATTAGTGCGAACCAGTTTCTTATCTGGTTGTTCCCTTACCTTACGAGCTCGATAGCCATGGAGGTTGTTTCGCAGCCTCTGTGCACCATTCTATTCGCCACGCGCAAACACTCACTTCTCATTCCGCAACAAATCCCTAATCCTTCTAAAAACTTTCCCTTCTTCTCTTTTCGCTCCACCACTCTCTCCTCTTCTTCGCGTTTTTCTCCTCCGTCTCTTTTGTTCGCGGCGCCGGAGAACCAATTGAGTGTTGGTGAAGGAGAGGACACCGATACAAGTGATTGGGCACTGCAAGATTTTTTTTCCCTGAGGAGGGATGTTGAAATTATGTTACAACGTGTTGAAGAGATTAGAGAGTCTTCTGGTCTACAATTACTGGAGCACGAACTTGCCAATTTGGAGGAGCAAGCAGCTGATAGCTCTTTCTGGGAAAATCGGGCCAAAGCTCAAAAGACTCTTTCGACCTTGGCTGATGTTAAAGAGAAGATAAAATTACTCAATGATTTTAAAACCCAGGTTGAGGATGCAGAAACAATAGTTCAGCTGACTGAGGAAATGGAATCCATTGACAGAGGACTTTTTGATGAGGCCGCCAATCTTATTAAAGAACTGAATAAATCACTAGATCGATATGAGCTAACTCAACTTCTCTCTGGTCCCTATGATAAAGAAGGTGCTGTTATCTCTATTACAGCAGGTGCTGGTGGTACTGATGCCCAGGATTGGGCAGACATGCTTCTTAGGATGTACGTGAGATGGGGTGAGAAACAGAGATACAAGACCAGAGTGATTGAGAAATCCCCCGGAGAAGAAGCTGGAATTAAATCTGCCACTGTTGAAGTTGAAGGTCGTTATGCATATGGGTATTTGTCTGGGGAGAAAGGAACACATCGCATTGTTCGTCAATCACCTTTTAATGCCAAAGGCCTTCGTCAGACAAGCTTTTCTGGTGTTGAGGTTATGCCTCTTCTTCCAGAGGAATCTATGGATGTTGAAATTCCCGAGGAGGACCTGGAAATTAGTTTTTCAAGAGCAGGTGGAAAGGGAGGTCAAAATGTGAACAAGGTCGAAACTGCAGTTCGGATAACACACATTCCAACTGGTGTCACTGTTCGCTGCACAGAGGAGAGATCACAACTAGCGAATAAGATCAGAGCTTTAAGCCGTTTGAAAGCCAAGTTGTTAGTTATAGCTGAAGAGCAGCGCGCATCAGAGATTAAGCAGATTCGTGGGGACGCAGTCAAGGCTGAATGGGGGCAACAAATACGGAACTATGTATTCCATCCGTACAAACTAGTTAAAGATGTAAGAACAGGGTATGAAACGACAGATGTCATCTCTGTAATGGATGGCGAGTTGGACCCCTTCGTCAAATCTTACCTCAAATTCAAGTTCAATATGTCACTGTCTACAAGTGTGGTTAACTGA 1503 0.4424 MCALYAIWTSILHLHPPSLVYLLWRISANQFLIWLFPYLTSSIAMEVVSQPLCTILFATRKHSLLIPQQIPNPSKNFPFFSFRSTTLSSSSRFSPPSLLFAAPENQLSVGEGEDTDTSDWALQDFFSLRRDVEIMLQRVEEIRESSGLQLLEHELANLEEQAADSSFWENRAKAQKTLSTLADVKEKIKLLNDFKTQVEDAETIVQLTEEMESIDRGLFDEAANLIKELNKSLDRYELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVIEKSPGEEAGIKSATVEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGVEVMPLLPEESMDVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIRALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETTDVISVMDGELDPFVKSYLKFKFNMSLSTSVVN 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02697 500 Gene3D Release factor 125 239 - -
Phco3g02697 500 ProSitePatterns Prokaryotic-type class I peptide chain release factors signature. 369 385 IPR000352 GO:0003747|GO:0006415
Phco3g02697 500 Pfam PCRF domain 151 343 IPR005139 GO:0006415
Phco3g02697 500 Pfam RF-1 domain 353 462 IPR000352 GO:0003747|GO:0006415
Phco3g02697 500 NCBIfam peptide chain release factor 2 135 487 IPR004374 GO:0005737|GO:0006415|GO:0016149
Phco3g02697 500 PANTHER PEPTIDE CHAIN RELEASE FACTOR 2 123 489 - -
Phco3g02697 500 SUPERFAMILY Release factor 151 489 IPR045853 -
Phco3g02697 500 Gene3D - 253 483 - -
Phco3g02697 500 SMART PCRF_a_2 206 318 IPR005139 GO:0006415
Phco3g02697 500 Gene3D - 349 445 - -
Phco3g02697 500 Hamap Peptide chain release factor 2 [prfB]. 124 490 IPR004374 GO:0005737|GO:0006415|GO:0016149
Phco3g02697 500 Coils Coil 219 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02697 Phco-Chr3 53458409 53468982 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02697 3 53458409 53468982 Phco3g02697 3 53458409 53468982 ECH