Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02684 ATGGTTATGGAAAATCAAAATTTGCTATCTCTCTTCATCCTCCTCCTCTTGGGTCATTGGATCCATGTTCAAGCTGCTCCTCCTAACTCTCTCGTCACACAACTCCCTGGCTTCAACTCCAATTTCCCATCCAACCACTATTCAGGGTATATAAGTATTGATGGAAATGATGAGAATGGGAAGAAGCTGTTCTATTACTTGGTGAGTTCAGAAAGAAGTGCAGAGAAGGACCCAGTGGTGCTATGGCTGAATGGTGGACCTGGGTGTTCCAGCTTCGATGGCTTCGTTTATGAGCATGGACCATTCAACTTTGAGGCTGCAAAATCAAAAGGGAATCTACCCACTTTGCACATCAACCCTTACAGCTGGTCCAAGGTTTCAAACATCATATATTTGGATTCTCCTGCTGGTGTCGGACTCTCTTATTCCAAGAACACAAGCAAATATGTTACTGGGGACCTGCAAACTGCGTCTGATACCCTTGTTTTCCTCTTAAAGTGGTTTCAGCAATTTCCAGAATTCCAGGCTAATCCATTTTATATTGCTGGAGAGTCTTACGCTGGAGTTTATGTGCCTACTCTGGCTTTTGAAGTTGCTAAAGGAATCCAAAGTGGTATAAAGCCCGTGATCAATTTTAAGGGTTACATGGTTGGAAATGGTGTCACGGACGAAATATTCGATGCCAATGCTCTCATCCCATTTGTGCATGGGATGGGCCTCATATCCGACAGTATCTATGAGGATTTACAAGCTACATGCAAAGGAAACTACTACGATGCTTACTCCTTGGATGAAAATGATGGGTGTTATAAGAGCATGGAAAAAGTTGACAGGGCCATTGATGGGCTTAACGTGTACAATATACTAGAGCCATGCTACCATTTCCCTGATACTGCAACAGCCAAACAAAATGGAAGCTTACCAATGAGTTTCAAGCAATTAGGAGTTACTGAGAAGCCTCTCCCAGTGAGGAAGAGAATGTTTGGAAGAGCTTGGCCTTTTCGAGCACCAGTCAAAGCTGGTCTTGTCACATTATGGCCTCAATTGGCTGAAACGAGCCATGTGGCTTGTGTTAATGATGAAGTAGCAAGCTTATGGCTGAACAACGATGCAGTGAGGAAAGCCATTCATGCTGAATCGGAAAATGTGGCGGGTGCATGGGAATTATGTACAAGTAGGATACAGTACCATCACGATGCTGGAAGCATGATTCCTTACCACAAGAACCTAACCAAGCTGGGCTACAAGGCACTTATTTTCAGTGGTGACCATGATATGTGTGTACCATTTACTGGAAGTGAGGCTTGGACTCGATCTCTGGGATATAAGATCGTGGACGAATGGAGGCCATGGAACTCAAATAACCAAGTCGCTGGGTACTTGCAAGCTTACGAGAACAACCTCACATTCCTAACAATCAAGGGAGCTGGGCACACCGTGCCAGAATATAAGCCACGGGAAGCGTTGGAATTTCTCAGCCATTGGTTGGAAGGAAAGAAAATATAA 1506 0.4422 MVMENQNLLSLFILLLLGHWIHVQAAPPNSLVTQLPGFNSNFPSNHYSGYISIDGNDENGKKLFYYLVSSERSAEKDPVVLWLNGGPGCSSFDGFVYEHGPFNFEAAKSKGNLPTLHINPYSWSKVSNIIYLDSPAGVGLSYSKNTSKYVTGDLQTASDTLVFLLKWFQQFPEFQANPFYIAGESYAGVYVPTLAFEVAKGIQSGIKPVINFKGYMVGNGVTDEIFDANALIPFVHGMGLISDSIYEDLQATCKGNYYDAYSLDENDGCYKSMEKVDRAIDGLNVYNILEPCYHFPDTATAKQNGSLPMSFKQLGVTEKPLPVRKRMFGRAWPFRAPVKAGLVTLWPQLAETSHVACVNDEVASLWLNNDAVRKAIHAESENVAGAWELCTSRIQYHHDAGSMIPYHKNLTKLGYKALIFSGDHDMCVPFTGSEAWTRSLGYKIVDEWRPWNSNNQVAGYLQAYENNLTFLTIKGAGHTVPEYKPREALEFLSHWLEGKKI 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02684 501 FunFam Carboxypeptidase 25 314 - -
Phco3g02684 501 Gene3D - 354 501 - -
Phco3g02684 501 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 485 IPR001563 GO:0004185|GO:0006508
Phco3g02684 501 ProSitePatterns Serine carboxypeptidases, histidine active site. 468 485 IPR033124 GO:0004185
Phco3g02684 501 FunFam Carboxypeptidase 403 498 - -
Phco3g02684 501 SUPERFAMILY alpha/beta-Hydrolases 32 499 IPR029058 -
Phco3g02684 501 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Phco3g02684 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Phco3g02684 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 468 481 IPR001563 GO:0004185|GO:0006508
Phco3g02684 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Phco3g02684 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Phco3g02684 501 FunFam Carboxypeptidase 356 500 - -
Phco3g02684 501 Gene3D alpha/beta hydrolase 25 324 IPR029058 -
Phco3g02684 501 Pfam Serine carboxypeptidase 36 498 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02684 Phco-Chr3 53366868 53371879 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02684 3 53366868 53371879 Phco3g02684 3 53366868 53371879 ECH