Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02682 ATGGCGCTGTCGTTTCTCACTCTCAGCGCAAACCCTTCTTCAATTATCTGCAAATGCAGAGCGTCCCTTCCCACCGCACCACACGCGCTCGCGCTCGACGCCACCTACATCCGACGCGCCGCCCACCTCGCCGACAAATCTGCCGGCTTCACTTCCCCCCACCCCAACTTTGGCTGCGTCATCCTCTCACCTGCCGGCCACGTCGCCGGCGAGGGCTACCTCTACGCGCAGGGCACCGCAGCCGCGGAGGTCCAGGCCGTCGACGCCGCCGGCGAACTCTGCCGAGGCGCTACGGCGTACCTGAACATGGAGCCCGGCGACTGCCACGGCGACCACAGTGCCGTGTCTGCTCTGTTCCAGGGAGGGGTTAAAAGAGTTGTGATTGGAATGAGGCATCCCTTGCAACATCTCCGTGGCAATGCTGTGCGTGCACTCAGAAATCAAGGACTGCATGTAGATATTCTCGGAGAGGATCTCACTAGTAATCACATTGAGGATGCACAGAGAGAGTGTCTTCTTGTCAATGCACCTTTGATTTGTAGGGCTGCTTCGCGTGTTCCCTTTTCTGTTCTCAAGTATGCTATGACCCTTGATGGAAAAATTGCTGCTAGCAGTGGCCATGCGTCATGGATAAGCAGCAAGCAGTCTAGAAATCTAGTGTTTGAGCTACGTGGTAGAAGTGACGCTGTCATTGTGGGAGGAAATACGGTTCGAAGGGACAATCCAAGACTAACAGCCAGACATGGAGGGGGACATATGCCAATGCGCATTGTGATGACCCAGACGCTTGATCTTCCAGAGGAAGCAAACCTGTGGGACATGGCTGAGGTTTCTACCATAGTTGTAACACAAAGGGGTGCAAGGAGGAGTTTCCAGAAGCTGCTTGCATCTAAAGGAGTTGAGGTTGTGGAGTTTGACATATTGACTCCCCAAGAAGTTATGGAGTATTTCCACGATCGTGGTTATCTTTCAATTTTATGGGAATGTGGAGGAACACTGGCGGCCTCTGCTATTTCATCTGGAGTAATTCACAAGGTTTATGCTTTTGTTGCTCCTAAAATTATTGGTGGAAAGAATGCACCATCTCCTGTGGGAGATCTTGGGATGGTGGAGATGACACAGGCTTTAAATCTAATTGATGTTTGCTACGAGCAGGTTGGACCCGACATGCTTATTAGTGGATTTCTTCAGCCCTTACCAGACATGATACCTGTAATCCCATCACGTGATGAAACTTTTGTTGTTGATCCTACTGTCTCACCATATGAGTCAAGGATCATATTTTTCTATAAAACATGGGATCTTTACGGTGCATTATCAAATTTCTCTCCTCATCCCATTCAAATGGGTGATGAAAATGGTGATTATGTTACTTGGTTGAGTGTTGAGCATTACTACCAGGCACACAAGTTTGTTGGGGTGGATGATCCTATGGCACAAGATTGCGTTGAAAGGATTAAATCTGCAAAAAGTCCAGAAGAAGCTGCAAGAATAGGACGGTCAATGCAAAAGCAGAAACCTAATCTGATAAGATCTGACTGGGAGAACATAAAGATCGATGTCATGTACAAGGCACTGAAATGCAAGTTCTCAATCTATCCGCATTTGAAAACTATGCTTCTATCCACTGCCGGTTCTGTTCTAGTTGAGGCTTCACCACATGATCTGTTTTGGGGTGGAGGCCGAGAGGGAGAAGGCTTAAATTATCTTGGCAGACTGTTGATGAAATTGAGATCTGAGTTTCTTGGGGAGTCTTCATCATCAAGTGAGACCCCTAGTTTAACTGTATAG 1791 0.4841 MALSFLTLSANPSSIICKCRASLPTAPHALALDATYIRRAAHLADKSAGFTSPHPNFGCVILSPAGHVAGEGYLYAQGTAAAEVQAVDAAGELCRGATAYLNMEPGDCHGDHSAVSALFQGGVKRVVIGMRHPLQHLRGNAVRALRNQGLHVDILGEDLTSNHIEDAQRECLLVNAPLICRAASRVPFSVLKYAMTLDGKIAASSGHASWISSKQSRNLVFELRGRSDAVIVGGNTVRRDNPRLTARHGGGHMPMRIVMTQTLDLPEEANLWDMAEVSTIVVTQRGARRSFQKLLASKGVEVVEFDILTPQEVMEYFHDRGYLSILWECGGTLAASAISSGVIHKVYAFVAPKIIGGKNAPSPVGDLGMVEMTQALNLIDVCYEQVGPDMLISGFLQPLPDMIPVIPSRDETFVVDPTVSPYESRIIFFYKTWDLYGALSNFSPHPIQMGDENGDYVTWLSVEHYYQAHKFVGVDDPMAQDCVERIKSAKSPEEAARIGRSMQKQKPNLIRSDWENIKIDVMYKALKCKFSIYPHLKTMLLSTAGSVLVEASPHDLFWGGGREGEGLNYLGRLLMKLRSEFLGESSSSSETPSLTV 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02682 596 NCBIfam conserved hypothetical protein 427 580 IPR012816 -
Phco3g02682 596 PANTHER DIHYDROFOLATE REDUCTASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_8G06820) 180 397 - -
Phco3g02682 596 SUPERFAMILY YbiA-like 414 583 IPR037238 -
Phco3g02682 596 NCBIfam riboflavin-specific deaminase C-terminal domain 186 392 IPR011549 GO:0008703|GO:0009231|GO:0050661
Phco3g02682 596 SUPERFAMILY Dihydrofolate reductase-like 186 393 IPR024072 -
Phco3g02682 596 CDD Riboflavin_deaminase-reductase 37 149 - -
Phco3g02682 596 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 31 153 IPR002125 -
Phco3g02682 596 FunFam Swarming motility protein ybiA 420 585 - -
Phco3g02682 596 Gene3D - 418 588 IPR037238 -
Phco3g02682 596 Pfam RibD C-terminal domain 189 391 IPR002734 GO:0008703|GO:0009231
Phco3g02682 596 Gene3D Cytidine Deaminase, domain 2 29 161 - -
Phco3g02682 596 SUPERFAMILY Cytidine deaminase-like 33 154 IPR016193 GO:0003824
Phco3g02682 596 Gene3D Dihydrofolate Reductase, subunit A 179 395 IPR024072 -
Phco3g02682 596 NCBIfam bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD 38 391 IPR004794 GO:0008835|GO:0009231
Phco3g02682 596 CDD NADAR 426 578 IPR012816 -
Phco3g02682 596 Pfam NADAR domain 428 581 IPR012816 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02682 3 53342457 53346381 Phco3g02682 3 53342457 53346381 ECH