Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02662 ATGGCGTCGGTGTTTGTGTACCACGTGGTGGGCGATCTGACGGTGGGGAAGCCGGAGCTGGTGGAGTTTCACGAGAGTGAGACGGTGGAGTCCGCGATTAGGGCGATCGGAGAGTCCCCTGAAGGGAGCATACCCATTTGGAAAAAGAGATCTCATGTGGGGATTGAGAATAGTGAGATGAGGCAGCAGAGGTTTGTTGGTATCCTTAGTTCTTTTGACATAGTTGCGTTTTTGGCTAAGAGTCAGTGTTTGGAGGATCAGGACAAGGCCTTGAAAATTCCTGTTTCTGAGGTTGTTGTTCCCAACAATTCGCTGCTCAGGCTCGTTGATCCTGCTACAAGGTTGATAGATGCGCTAGACATGATGAAACAAGGTGTGAAACGTCTGCTTGTTCCGAAGAGTGTAGCATGGAAGGGCATGAGTAAGCGATTCTCAGTTATCTACTACGGCAAGTGGCTCAAGAATAATGATTCTCCTAGCAACAGCAGCAACAATCTACCTCCTAACTTGAATTGGAGCCCCTCAACTTCTGGCACTGTTATCCGTGATAAGTACTGTTGTCTCTCTAGAGAAGATGTTCTCCGTTTCATCATTGGTTGTCTTGGCGCTTTGGCTCCCCTTCCTCTCACTTCCATTGTTGCTCTTGGAGCAATTAATGCAGACTACAGCTATATTGAATCCTCTACTCCAGCCATTGCAGCCACCAAAAAGCTTCCTCAAGATCCAAGTGCAGTTGCTGTGACAGAAAACACATCAGATGGTCAGTGTAAGATCCTTGGAGAAATTTCTGCATGCAAGTTATGGAAATGCGATTACTTAGCAGCAGCATGGGCTTTGGCGAATCTCTCGGCCGGACAGTTTGTCATGGGAGTTGAAGATAATGTTAGCTCAAGGTCACTGCCGGAGTTCAGTGTAGATTCACCAACTGGAGACAGTGATTTAGTTAATGGTTCAAGGAAACCAAGGAAATTCAGTAGCAGGAGTATTGGGTTCTTCAGCAATTCTGGGAGCCACAGTTTTGGTTCCAGGAGCATGTATAGGGGTAGGAGTGCTCCTCTGACATGTAAACTCACTAGTTCACTGGCTGCAGTCTTGGCTCAGATGCTATCCCACAGGGCAACTCATGTTTGGGTGACCGAGGACGAGAATGACGAGGTCTTGGTCGGTGTGGTTGGATACACTGATATTTTAGCTGCTGTAACCAAACCGCCTACAACCATGATTCCTGTTAATAGATCTGCAGAGGGGTTTGGAAATGAAATTCAGTGTTGA 1272 0.4709 MASVFVYHVVGDLTVGKPELVEFHESETVESAIRAIGESPEGSIPIWKKRSHVGIENSEMRQQRFVGILSSFDIVAFLAKSQCLEDQDKALKIPVSEVVVPNNSLLRLVDPATRLIDALDMMKQGVKRLLVPKSVAWKGMSKRFSVIYYGKWLKNNDSPSNSSNNLPPNLNWSPSTSGTVIRDKYCCLSREDVLRFIIGCLGALAPLPLTSIVALGAINADYSYIESSTPAIAATKKLPQDPSAVAVTENTSDGQCKILGEISACKLWKCDYLAAAWALANLSAGQFVMGVEDNVSSRSLPEFSVDSPTGDSDLVNGSRKPRKFSSRSIGFFSNSGSHSFGSRSMYRGRSAPLTCKLTSSLAAVLAQMLSHRATHVWVTEDENDEVLVGVVGYTDILAAVTKPPTTMIPVNRSAEGFGNEIQC 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02662 423 SUPERFAMILY CBS-domain pair 6 133 IPR046342 -
Phco3g02662 423 SMART cbs_1 19 79 IPR000644 -
Phco3g02662 423 SMART cbs_1 351 401 IPR000644 -
Phco3g02662 423 Gene3D - 332 402 IPR046342 -
Phco3g02662 423 ProSiteProfiles CBS domain profile. 345 407 IPR000644 -
Phco3g02662 423 Pfam CBS domain 351 400 IPR000644 -
Phco3g02662 423 CDD CBS_pair_SF 23 131 - -
Phco3g02662 423 Gene3D - 5 135 IPR046342 -
Phco3g02662 423 MobiDBLite consensus disorder prediction 299 321 - -
Phco3g02662 423 SUPERFAMILY CBS-domain pair 351 401 IPR046342 -
Phco3g02662 423 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 7 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02662 Phco-Chr3 53180086 53182257 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02662 3 53180086 53182257 Phco3g02662 3 53180086 53182257 ECH