Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02660 ATGGTTTCCCTGTCTACCACCACTCCCTTTTTCCCCTTCACTGCACAAAACGCTTCCACCGGAATCCCTCCTCCCCATTCCTTCCTTTACAGCAAGCAACGTGTTAGGGATCACAGGAAGGTTGTCTGCGCCTGCATCGCACCTCCGCAGAACTTCAAGAGCCAGGACTCCTCCCCTATTAATTTCAATGGTTTGCACAAATCAGAACAGCTGAGCGCGGCGCGGGATCGCGATGATGATTCTGATGTTCTTATTGAGTGTAGAGATGTGTACAAATCTTTTGGGGAAAAGAAAATCTTAAATGGTGTCAGCTTCAAGATCAGGCATGGTGAAGCTGTTGGAATAATTGGTCCCTCTGGGACTGGTAAATCTACAGTTTTGAAGATTATAGCAGGACTTCTTGCTCCGGATAGGGGGGAAGTTTACATTCGAGGAAAAAAGAGGGTTGGTTTAGTAAGCGATGATGACATATCTGGTCTTCGGATTGGATTAGTTTTCCAAAGTGCCGCACTCTTTGATTCCATGAGTGTTCGGGAAAATGTTGGTTTTCTCTTGGATGAACACTCGAGCATGTCTAAGGACCAGATATCAGAGCTTGTCAAGGAAACCTTGGCTGCAGTTGGATTGAAGGGAGTTGAAGATCGGTTGCCTTCTGAGTTATCAGGTGGGATGAAAAAGCGAGTTGCTTTAGCTCGATCTATTATCTGTGACACCACAAAGGAATCAATTGAACCAGAGGTGCTTTTATATGACGAACCAACTGCTGGACTTGATCCTATTGCATCTACTGTTGTTGAGGATCTGATTCGCTCAGTGCACATAAAAGGACGAGATGCTCGTGGAAAACCTGGGAATATTGCATCTTATGTGGTTGTTACTCACCAACATAGTACCATTAAAAGAGCCATTGATAGATTGTTGTTTCTACACAAGGGAACGATTGTTTGGGAAGGAATGACTCATGAATTTACAACTTCTACAAATCCAATTGTTCAGCAGTTTGCATCCGGGAGCCTAGATGGTCCTATCAGATATTAG 1038 0.4432 MVSLSTTTPFFPFTAQNASTGIPPPHSFLYSKQRVRDHRKVVCACIAPPQNFKSQDSSPINFNGLHKSEQLSAARDRDDDSDVLIECRDVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTVLKIIAGLLAPDRGEVYIRGKKRVGLVSDDDISGLRIGLVFQSAALFDSMSVRENVGFLLDEHSSMSKDQISELVKETLAAVGLKGVEDRLPSELSGGMKKRVALARSIICDTTKESIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGRDARGKPGNIASYVVVTHQHSTIKRAIDRLLFLHKGTIVWEGMTHEFTTSTNPIVQQFASGSLDGPIRY 345
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02660 345 Pfam ABC transporter 100 255 IPR003439 GO:0005524
Phco3g02660 345 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 85 336 IPR003439 GO:0005524
Phco3g02660 345 SMART AAA_5 109 313 IPR003593 GO:0016887
Phco3g02660 345 CDD ABC_Org_Solvent_Resistant 85 334 - -
Phco3g02660 345 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 326 IPR027417 -
Phco3g02660 345 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 17 345 - -
Phco3g02660 345 Gene3D - 72 337 IPR027417 -
Phco3g02660 345 ProSitePatterns ABC transporters family signature. 220 234 IPR017871 GO:0005524|GO:0016887
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco3g02660 Phco-Chr3 53167577 53171713 Dispersed/Transposed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02660 3 53167577 53171713 Phco3g02660 3 53167577 53171713 ECH