Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02651 ATGGCTTCACACATTGCTCTTCTTCGAGCCCCTCCTCTTTCAATTTCTACTCACCGCTTCCATGCAAAGCAAATTTGCATAAGCGGACTCAAATTAGCCACTGCCACCACTACTTCTTCTTCTTGCTTTCCGTGCTCCATAACAACACAGAGAGGCTCTTTTTCCTCAGTGATTGCATGTTCCTCTTCAAATGGAAGAGACCCGGGTTCGGTGGACGATGATGAGGTACAAAAGGAGCTCATCCTCGAAGAGAAACGACGAGCTGCATTGTCTGCGAGGATTGCCTCAGGGGAATTCACCGTGAAGCAGAAGTCTGTTTTGGTTTCTATACTGGAGGGATTGGCAAAGGTGGGGGTGCCCAATGAAGTTCTGGAATTTTTGTTTGGTTGGGTTGAAGGGGGTGGTGAGCACCCCAAAATTCCTGAGGCAAAAGGGTCAATCAAAGCTGTTCGAAGTGTGGCCTTTTTCATTCCCTTGTATGAACTTTACCTCACATATGGTGGGATTTTTAGGTTGACGTTTGGACCAAAGTCCTTTCTGATAGTATCTGATCCGACTATTGCAAAACACATATTGAAAAACAATTCAAAGGCTTATTCGAAGGGCATCTTGGCTGAGATCCTAGAATTTGTAATGGGGAAAGGTCTCATCCCAGCTGATGGTGAGATATGGCGAGTTAGACGCCGTGCTATAGTCCCAGCATTGCACCAGAAGTACGTAGCAGCTATGATTGGCCTTTTTGGACAAGCCGCAGATAGGCTCTGCCAGAAGCTAGATGCTGCTGCATCCGATGGAGAAGATGCTGAGATGGAGTCACTTTTCTCTCGATTGACCTTGGACATCATTGGAAAGGCAGTATTCAATTATGATTTTGATAGTTTATCAAACGACACTGGTATAATTGAGGCTGTTTATACTGTACTGAGAGAAGCAGAAGATCGAAGTGTTGCTCCAATTCCAGTATGGGATATCCCAATATGGAAAGATGTATCACCACGTTTGAGGAAGGTTAATCAAGCTCTCAAATTGATCAATGATACGCTTGATGATCTGATAGCAATATGCAAGAGAATAGTGGATGAAGAAGAGTTACAGTTTCATGAGGAGTACATGAATGAAAAAGATCCAAGTATTCTACACTTCTTGTTAGCGTCAGGAGATGATGTATCAAGCAAGCAACTTCGTGATGACTTAATGACCATGCTCATTGCTGGACATGAAACATCAGCTGCTGTTTTAACTTGGACCTTTTATATTCTATCCAAGGAGCCTAGGGTCATGTCCAAGCTCCAAGAAGAGGTTGACTCTGTACTTGGAGATAGATATCCAACAATTGAAGATATGAAGAAACTCAAATACACAACCCGAGTGATCAATGAGTCATTGAGGCTTTACCCACAACCACCTGTGTTAATTCGTCGCTCGCTTGAGAATGATGTTCTTGGAGAGTACCCTATAAAGAGAGGTGAAGATATATTTATATCTGTCTGGAACCTGCATCGCAGTCCAGAACTGTGGGATAATGCTGACAAGTTTGAGCCTGAAAGATGGTCATTAGATGGACCAAACCCCAACGAGACTAATCAAAGCTTCAAATATCTTCCGTTTGGTGGAGGACCACGGAAATGTATAGGTGATTTGTTTGCTACATACGAGACTGTAGTAGCACTTGCAATGCTTGTTAGACGGTTCAACTTTCAAATGGCAGTTGGAGCTCCACCTGTTGAGATGACTACTGGAGCTACAATTCATACGACACAAGGCCTGAAGATGACTGTAACACACAGAATAAAACCTCCTATTGTGCCCTCATTACAGATATCAACTTTGGAAGTGGATCCATCCATAAGCCTTTCTGATCAGGATGAAATAAGTCAGAAAGGCCAAGTTTATCAGGCTCAGGCTCAGGCTCAGGCTCAGCCCTAA 1926 0.4356 MASHIALLRAPPLSISTHRFHAKQICISGLKLATATTTSSSCFPCSITTQRGSFSSVIACSSSNGRDPGSVDDDEVQKELILEEKRRAALSARIASGEFTVKQKSVLVSILEGLAKVGVPNEVLEFLFGWVEGGGEHPKIPEAKGSIKAVRSVAFFIPLYELYLTYGGIFRLTFGPKSFLIVSDPTIAKHILKNNSKAYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIGLFGQAADRLCQKLDAAASDGEDAEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIIEAVYTVLREAEDRSVAPIPVWDIPIWKDVSPRLRKVNQALKLINDTLDDLIAICKRIVDEEELQFHEEYMNEKDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYILSKEPRVMSKLQEEVDSVLGDRYPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLENDVLGEYPIKRGEDIFISVWNLHRSPELWDNADKFEPERWSLDGPNPNETNQSFKYLPFGGGPRKCIGDLFATYETVVALAMLVRRFNFQMAVGAPPVEMTTGATIHTTQGLKMTVTHRIKPPIVPSLQISTLEVDPSISLSDQDEISQKGQVYQAQAQAQAQP 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02651 641 Pfam Cytochrome P450 161 579 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02651 641 Gene3D Cytochrome P450 138 602 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02651 641 PRINTS E-class P450 group I signature 543 566 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02651 641 PRINTS E-class P450 group I signature 163 182 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02651 641 PRINTS E-class P450 group I signature 393 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02651 641 PRINTS E-class P450 group I signature 413 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02651 641 PRINTS E-class P450 group I signature 455 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02651 641 PRINTS E-class P450 group I signature 277 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02651 641 PRINTS E-class P450 group I signature 495 519 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02651 641 PRINTS E-class P450 group I signature 533 543 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02651 641 FunFam Carotene epsilon-monooxygenase, chloroplastic 141 598 - -
Phco3g02651 641 SUPERFAMILY Cytochrome P450 154 596 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02651 641 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 536 545 IPR017972 GO:0005506|GO:0016705
Phco3g02651 641 CDD CYP97 157 590 - -
Phco3g02651 641 PRINTS P450 superfamily signature 543 554 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02651 641 PRINTS P450 superfamily signature 404 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02651 641 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02651 641 PRINTS P450 superfamily signature 534 543 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02651 641 PANTHER CYTOCHROME P450 FAMILY 4 156 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02651 Phco-Chr3 53101521 53107054 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02651 3 53101521 53107054 Phco3g02651 3 53101521 53107054 ECH