Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02539 ATGAAGATTAATTTCCTTTCAAAAGCAACCTTTGTTCTTTTGGTCTTTCTCTTCCTATCAAACTGTTTGAACATTGGAGCTGAAAAATGTCACCCCAGTGGCAGAGTTAAAGGTGGAAAGATCCCTTCAGGGCAGTGCAATGAAGAGGATGATTTATGTTGTGTGCCTGGAAAAACATATCCCACATACACATGTTCACCACCAGTCTCTAGTCACACCAAAGCATATCTCACTCTTAACAGCTTTGAGAAGGGTGGAGATGGTGACAGCCCTGCAAAATGTGACAACCAATATCATTCTGATTACACACCTGTGGTGGCACTTTCCAGTGGATGGTTCAACCACAGGAGCATGTGCCTCCGCAACATCACCATTAGTGGTAATGGCAGAAGTGTGGTGGCCATGGTGGTTGATGAATGTGACTCATCAAAGGGATGTGATAAACATGATGGCTATCAACCTCCTTGTGCCAACAACATTGTTGATGCCTCAATGGCTGTGTGGAAAGCCTTAGGCATCCCCATGACCCAATGGGGAGGGATGGATATTACATGGTCTCGTGCTTAA 567 0.448 MKINFLSKATFVLLVFLFLSNCLNIGAEKCHPSGRVKGGKIPSGQCNEEDDLCCVPGKTYPTYTCSPPVSSHTKAYLTLNSFEKGGDGDSPAKCDNQYHSDYTPVVALSSGWFNHRSMCLRNITISGNGRSVVAMVVDECDSSKGCDKHDGYQPPCANNIVDASMAVWKALGIPMTQWGGMDITWSRA 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02539 188 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 10 186 IPR039271 -
Phco3g02539 188 CDD DPBB_kiwellin-like 60 186 - -
Phco3g02539 188 Gene3D - 76 188 IPR036908 -
Phco3g02539 188 SUPERFAMILY Barwin-like endoglucanases 62 187 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02539 Phco-Chr3 52032495 52033061 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02539 3 52032495 52033061 Phco3g02539 3 52032495 52033061 ECH
Phco3g02539 3 52032495 52033061 Phco1g00799 1 7418999 7419565 PCT