Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02391 ATGGGGAATTGCGTGGCTAAGTCTCAAGCTAAGGATAGTGATTCTGATCATGATGTGGAGTTTGCTGGTGGCAAAGTGAAACTTATTACCACCAAAGAAGCTTGGGACCAATATTTGGAAGAAGCAAGGAGGGATGGCAAAATTGTGATTGCGAATTTCAGTGCAACATGGTGTGGTCCTTGTAAGGTGATTGCGCCATATTACTGCGAGTTATCTGAGAAATACACATCCATGATGTTCTTATTAGTTGATGTGGATGAACTAACTGAGTTCAGCACTTCATGGGACATCAAAGCTACACCAACTTTCTTCTTTCTTAAAGAGGGACAACAACTTGACAAACTTGTAGGAGCCAACAAGCCAGAGCTGCAGAAGAAGGTTGTTGCCATCAATGATTCACTTCCCGAATACAAGCAGTGA 420 0.4238 MGNCVAKSQAKDSDSDHDVEFAGGKVKLITTKEAWDQYLEEARRDGKIVIANFSATWCGPCKVIAPYYCELSEKYTSMMFLLVDVDELTEFSTSWDIKATPTFFFLKEGQQLDKLVGANKPELQKKVVAINDSLPEYKQ 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02391 139 Gene3D Glutaredoxin 1 137 - -
Phco3g02391 139 PANTHER THIOREDOXIN 26 127 - -
Phco3g02391 139 FunFam Thioredoxin H9 1 138 - -
Phco3g02391 139 CDD TRX_family 33 127 - -
Phco3g02391 139 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Phco3g02391 139 Pfam Thioredoxin 29 127 IPR013766 -
Phco3g02391 139 PRINTS Thioredoxin family signature 96 107 - -
Phco3g02391 139 PRINTS Thioredoxin family signature 57 66 - -
Phco3g02391 139 PRINTS Thioredoxin family signature 49 57 - -
Phco3g02391 139 ProSiteProfiles Thioredoxin domain profile. 8 132 IPR013766 -
Phco3g02391 139 SUPERFAMILY Thioredoxin-like 22 127 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02391 Phco-Chr3 50486144 50488819 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02391 3 50486144 50488819 Phco3g02391 3 50486144 50488819 ECH
Phco3g02391 3 50486144 50488819 Phco1g02036 1 60115489 60118233 PCT