Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02108 ATGGATAGTACTATCACCCAACAAGAAGTGAGAGAACAAAAACATACCCAACAACAGCATCAGAAGCATTGTGCCCCTTTGGTGAGCCTCAGAAGGTCCACTAATCCTAACCCGGTTTCCATTCTGGTCTTCTGGGTGTCTAAATCTCTTAGAAGTTTGTGTTTCAGAGTTCAACTCTCACAAGGGTTTTGCTTGAGGAGGATTCAGTACCATGGCATGGTGATTAACACCTCTGTCCTCTATGCTTCTTCTTCTTCTTCATCTGCTTTTGTTGAAGGGAAAGCTGCTGCAATGGAGGGTTTGAGTTTGGTTGAGAAGAATGAGGTTGTTGAAGAAAGTAAAGGAAGTGAAAATGGTGGTAAGAGAGAAACTTTTGCTGATTTGATTGAAGAAAAGGGTCGTGAGAGCAGTTTCAGCTCAGATTTTCTGTCATCAGAGACCACCCATGAGGAGCACAGTAGGAGTAGCACCGAGGACTCGTCTTCACCACCTTCGGTGGGGTGGACGGTTCAGGAAATTGCGGCATCAGATTGTGCCAGTCCTCATGGCAGTGAAGATGGAGAGAAGAAGCACTCGGTTTTGGAGAATAAGGAGTTTAAGAAACAAGTTTCAGTCTCACCAGAGATTGAGATGATGAAGGAGAGGTTTGCAAAATTGTTACTTGGAGAAGATATGTCAGGTTGTGGAAATGGGGTCCCTACAGCCTTGGCCATCTCAAATTCCATAACCAATCTGTGTGCTACACTCTTTGGGCAACTTTGGAGATTAGAACCCCTGCGTTCAGAGAAGAAAGCGATGTGGCGAAGAGAGATAGAGTGGTTTCTTTCTGTCAGTGATCATATAGTTGAATTAACACCTAATTGGCAGACATTTCCAGATGGAAGCAAGCTTGAGGTCATGACTTGTCGACCGCGCTCAGATCTTTATGTCAATCTTCCAGCTCTGCGCAAATTAGATAACATGCTTCTTGAAATTCTAGATAGTTTTGTCAATACAGAGTTCTGGTATGTAGACCAGGGGGTTCTAGCTCCAGATGCCGATGGTCCATCTTCATTTCGACAGGCACTTCAGCGGCAGGAGGAGAAATGGTGGCTTCCTGTACCACGAGTCCCTCCCTGTGGTCTCCATGAAAACTCAAGGAAGCAGTTGCAGCACAAACGTGATTGCACAAACCAAATATTAAAGGCTGCAATGGCCATTAACAGCATCACTTTAGGAGAAATGGACATTCCTGAGTCCTATTTGGAATCTCTTCCAAAGACTGCTAGACTAAGCTTGGGGGATGTTATACATCGTTACATCACATCCGATCATTTTTCTCCTGAATGCTTGCTAGCTTGCCTTGATTTATCTTCTGAGCATCAAGCTATAGAGATTGCGAACCGAGCCGAGGCTTCCATGTATATTTGGCGCAAAAAGACCAACTCCAAGCCCGCAATCAGTGCCAGGTCTAGTTCAAGATCATCATGGGAAATGGTCAAGGATCTGATGGTTGATGCAGACAAGAGGGATTTGTTTGCAGAGAGAGCAGAAAGCCTTTTGCTTTCTTTGAAGCAGCGTTTTCCTGGTTTGTCTCAAACAACCTTGGATACGAGCAAAATCCAATACAACAAGGATGTTGGAAAAGCCATTTTGGAGAGCTACTCTAGAGTATTGGAGAGTTTGGCATTTAACTTGGTAGCACGGATTGATGATGTGCTCTATGTGGACGACTTGACCAAACATTCAGATCAGATCTCTTCTCTCTCAAAAGTTGGTGTAGTAACTCACAAGCAGAGTATGCCAGTTCCATACTCCGTACCTGTCCCGAGCACACCCTACAAATCGGCTTTCGGCACACCAGCTCTTTCTCCATCACACAGTAGTCCTTCCAAGGGAGGGAGGTCTCTACTCAGCAATGACAACAGCCTCCCCCAAAGAGGGTCAGGGGTGAAGAAATCTTTGACTGATTTTCTTAGCATTGAACCAAAAGGGAGGGACAGTGACTGTTCAATTGAGAAACAAGTTTCAGAATCAAATAGAGTTGACGAAGAAGTGTCAACATGTGAAACAGATGTGGAGTCAAGTGATTGCGCAGAAGGTGGTGCCAGCCCAAGTATCCTGGACCGGAAATGGCATGTTTGA 2124 0.4496 MDSTITQQEVREQKHTQQQHQKHCAPLVSLRRSTNPNPVSILVFWVSKSLRSLCFRVQLSQGFCLRRIQYHGMVINTSVLYASSSSSSAFVEGKAAAMEGLSLVEKNEVVEESKGSENGGKRETFADLIEEKGRESSFSSDFLSSETTHEEHSRSSTEDSSSPPSVGWTVQEIAASDCASPHGSEDGEKKHSVLENKEFKKQVSVSPEIEMMKERFAKLLLGEDMSGCGNGVPTALAISNSITNLCATLFGQLWRLEPLRSEKKAMWRREIEWFLSVSDHIVELTPNWQTFPDGSKLEVMTCRPRSDLYVNLPALRKLDNMLLEILDSFVNTEFWYVDQGVLAPDADGPSSFRQALQRQEEKWWLPVPRVPPCGLHENSRKQLQHKRDCTNQILKAAMAINSITLGEMDIPESYLESLPKTARLSLGDVIHRYITSDHFSPECLLACLDLSSEHQAIEIANRAEASMYIWRKKTNSKPAISARSSSRSSWEMVKDLMVDADKRDLFAERAESLLLSLKQRFPGLSQTTLDTSKIQYNKDVGKAILESYSRVLESLAFNLVARIDDVLYVDDLTKHSDQISSLSKVGVVTHKQSMPVPYSVPVPSTPYKSAFGTPALSPSHSSPSKGGRSLLSNDNSLPQRGSGVKKSLTDFLSIEPKGRDSDCSIEKQVSESNRVDEEVSTCETDVESSDCAEGGASPSILDRKWHV 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02108 707 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 124 616 IPR038937 GO:0005085
Phco3g02108 707 MobiDBLite consensus disorder prediction 657 681 - -
Phco3g02108 707 ProSiteProfiles PRONE domain profile. 199 580 IPR005512 GO:0005085
Phco3g02108 707 MobiDBLite consensus disorder prediction 611 644 - -
Phco3g02108 707 FunFam Rop guanine nucleotide exchange factor 7 409 536 - -
Phco3g02108 707 MobiDBLite consensus disorder prediction 1 24 - -
Phco3g02108 707 Gene3D PRONE domain, subdomain 1 441 580 - -
Phco3g02108 707 Gene3D PRONE domain, subdomain 1 199 440 - -
Phco3g02108 707 MobiDBLite consensus disorder prediction 657 707 - -
Phco3g02108 707 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 208 574 IPR005512 GO:0005085
Phco3g02108 707 MobiDBLite consensus disorder prediction 611 643 - -
Phco3g02108 707 MobiDBLite consensus disorder prediction 132 166 - -
Phco3g02108 707 FunFam Rop guanine nucleotide exchange factor 14 441 579 - -
Phco3g02108 707 FunFam Rop guanine nucleotide exchange factor 1 200 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02108 Phco-Chr3 46922520 46926281 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02108 3 46922520 46926281 Phco3g02108 3 46922520 46926281 ECH
Phco3g02108 3 46922520 46926281 Phco1g01446 1 50061349 50066249 PCT