Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01872 ATGGGGTGTTTGGATGATGGACGTTTCGCTGTTGTGATTGAAAATGGAGTGAACAATGACTGTGGTGAAGTGGGGTTGGGGAATGATGGTGGTGCCATTGAGGAGGCTGTGAAGGTTTTGTTGGAGGGTCTAGGGGAAGATGTAAACAGGGAAGGACTTAGGAAGACACCACTTCGTGTTGCCAAGGCCCTTAGTGAAGGAACCAGAGGTTACAGGCAAAAGGTGAAGGACATAGTTCAAGGTGCTTTATTCCCTGAAGCTGGTCTAGATAATAGAGTTGGTCATGCAGGTGGAGCAGGTGGACTTGTGATCGTTCGAGATCTTGACTTGTTTTCTTATTGTGAGTGTTGCTTGCTTCCATTCCAGGTCAAGTGTCATGTGGGTTATGTGCCCTCTGGTGAAAGAGTTGTTGGTTTGAGCAAGCTCTCTCGTGTTGCTGAGGTATTTGCAAAACGGCTTCAAGAGCCTCAACGTATGGCTGATGAGATGTGTTCTGCTTTGCATCAGGGAATAAAGCCAGCAGGTGTTGCTATCATACTTCAGTGTACACACATACACTTTCCAGACATAGAATCAGTCTTTCTTGACTCAAACCACAAAGGATGGGTTAAGATACTTGTTTCCTCAGGTTCTGGGGATTTTGAGAACAAAAATGCAGATGTATGGAATGATTTCTTTAGTCTTCTTAAATTTAGAGGCATCAGTGTGGATAAAATTCACTTCAGAGGATCATCTGACCCTTGCTGGTGTCCTTCTCAGTCTTTTCTCTCTGCCAAAGTTTCCTCCAAAATCGGACCAGTCAATCCTGTAATGATCTCTGCAGTAGCCTCGATCATTGAATCTTTGGGAGAAGATCCTTTGAGGGACGAGCTTATAGGGACCCCAACTAGATTTGTGAAATGGTTGATGAACTTTCAAAACAGTAAGTTTGATGTGAAGTTGAATGGTTTTCTTTATGGTGGGATAGATGCTTTGAATGTAAATGAGGAGATTAATTTAAACAAAAAAATAACGTCTGAGCTGAACATACCTTTTTGGTCACAATGTGAGCATCATTTACTTCCATTTCATGGTGTTGTTCACATAGGATACCTCATATCTGATGGATTCAATCCTATAGGAAAATCACTTCTACAATCAATAGTACATTTTTATGGTTTCAAGCTCCAAGTTCAGGAAAGGCTTACCAGGCAGATAGCTGAAACCATTTCCCCACTGTTAGGGGGAGATGTGATAGTAGTTGTAGAGGCAAGTCACACATGTATGATCTCTAGGGGAATTGAGAAATTTGGAAGTAGTACGGCTACCATTGCTGTGTTAGGACGATTTTCAACCGACCCTACTGCTAGAGCTTCATTCTTGCAGAGTATTCCAAGTCCTACATCTACTGGGGAGCAATGA 1401 0.4254 MGCLDDGRFAVVIENGVNNDCGEVGLGNDGGAIEEAVKVLLEGLGEDVNREGLRKTPLRVAKALSEGTRGYRQKVKDIVQGALFPEAGLDNRVGHAGGAGGLVIVRDLDLFSYCECCLLPFQVKCHVGYVPSGERVVGLSKLSRVAEVFAKRLQEPQRMADEMCSALHQGIKPAGVAIILQCTHIHFPDIESVFLDSNHKGWVKILVSSGSGDFENKNADVWNDFFSLLKFRGISVDKIHFRGSSDPCWCPSQSFLSAKVSSKIGPVNPVMISAVASIIESLGEDPLRDELIGTPTRFVKWLMNFQNSKFDVKLNGFLYGGIDALNVNEEINLNKKITSELNIPFWSQCEHHLLPFHGVVHIGYLISDGFNPIGKSLLQSIVHFYGFKLQVQERLTRQIAETISPLLGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDPTARASFLQSIPSPTSTGEQ 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01872 466 PANTHER GTP CYCLOHYDROLASE I 32 185 IPR001474 GO:0003934|GO:0046654
Phco3g01872 466 FunFam GTP cyclohydrolase 1 97 232 - -
Phco3g01872 466 Gene3D - 327 459 IPR043133 -
Phco3g01872 466 FunFam GTP cyclohydrolase 1 328 459 - -
Phco3g01872 466 Gene3D - 29 79 IPR043134 -
Phco3g01872 466 Pfam GTP cyclohydrolase I 33 185 IPR020602 -
Phco3g01872 466 Pfam GTP cyclohydrolase I 273 457 IPR020602 -
Phco3g01872 466 Gene3D - 96 232 IPR043133 -
Phco3g01872 466 Gene3D - 267 309 IPR043134 -
Phco3g01872 466 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 269 458 - -
Phco3g01872 466 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 18 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01872 Phco-Chr3 42793462 42796885 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01872 3 42793462 42796885 Phco1g01697 1 55012256 55015077 PCT