Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01687 ATGGCAACTCAGACAACAGTTGAAAACAATTATCTCAAAAACGCTACTGAAGAAGAATTGCAGAGGCAGAAGGCAATTGATGATTGGCTTCCAATTACTTCTTCAAGGAATGCAAAATGGTGGTATTCTGCCTTTCACAATGTCACTGCCATGGTTGGGGCTGGTGTTCTTAGTCTACCCTATGCCATGTCTGAGCTAGGATGGGGTCCTGGTGTAACTGTACTTGTTCTGTCATGGATCATCACCCTTTACACTCTATGGCAAATGGTTGAGATGCATGAAATGGTTCCTGGCAAACGTTTTGACAGATACCATGAACTGGGGCAGTATGCCTTTGGGGAAAAGCTAGGACTTTATATTGTGGTGCCTCAACAACTTGTGGTTGAAATTGGGGTCAACATTGTCTACATGGTGACTGGGGGAAAATCCTTGCAGAAGTTCCATGATACTGTGTGTGACAACTGCAAAAAGATCAAGTTGACCTTCTTTATCATGATTTTTGCCTCTGTTCACTTTGTATTGTCTCACCTGCCCAACTTCAACTCCATTTCTGGTGTATCTCTGGCAGCAGCAGTTATGTCCCTAAGTTACTCTACAATTGCCTGGGCAGCTTCTGCTCACAAGGGTGTTCAAGAAGATGTACAGTATGGTTACAAAGCTAAGAGTACATCAGGAACAGTCTTTAACTTCTTTAGTGCCCTTGGTGATGTTGCTTTTGCCTACGCTGGACACAATGTGGTGTTGGAAATCCAAGCAACAATTCCATCTACTCCAGAGAAACCATCCAAGGGTCCTATGTGGAAAGGAGTGGTTGTTGCTTACATAGTTGTGGCTCTATGCTACTTCCCAGTTGCCCTCATTGGTTACTGGATGTTTGGCAATGGGGTTCAAGACAACATTCTCATCAGTCTAGAGAAACCAAAATGGCTTATTGCAATGGCTAACATGTTTGTGGTGATACACGTTATTGGAAGTTATCAGATTTATGCAATGCCAGTGTTTGACATGATCGAAACAGTGTTGGTGAAGAAGTTGAACTTCAATCCTAGTAGAGTGCTTCGCTTTGTTGTACGCAATTTGTACGTGGCATTCACAATGGTCGTTGCTATTACCTTCCCATTCTTTGGTGGTCTACTAGGATTTTTCGGAGGATTTGCTTTTGCACCTACAACATACTTTCTCCCCTGTGTCATGTGGCTTGCAATCTACAAACCAAAGAGATTCAGCTTGTCTTGGTGCACCAACTGGATCTGCATTGTGCTTGGCCTAATGTTGATGATTTTATCACCAATTGGAGGATTGAGGACAATCATAATTGATGCCAAGAACTACAAGTTCTACTCATAA 1347 0.4269 MATQTTVENNYLKNATEEELQRQKAIDDWLPITSSRNAKWWYSAFHNVTAMVGAGVLSLPYAMSELGWGPGVTVLVLSWIITLYTLWQMVEMHEMVPGKRFDRYHELGQYAFGEKLGLYIVVPQQLVVEIGVNIVYMVTGGKSLQKFHDTVCDNCKKIKLTFFIMIFASVHFVLSHLPNFNSISGVSLAAAVMSLSYSTIAWAASAHKGVQEDVQYGYKAKSTSGTVFNFFSALGDVAFAYAGHNVVLEIQATIPSTPEKPSKGPMWKGVVVAYIVVALCYFPVALIGYWMFGNGVQDNILISLEKPKWLIAMANMFVVIHVIGSYQIYAMPVFDMIETVLVKKLNFNPSRVLRFVVRNLYVAFTMVVAITFPFFGGLLGFFGGFAFAPTTYFLPCVMWLAIYKPKRFSLSWCTNWICIVLGLMLMILSPIGGLRTIIIDAKNYKFYS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01687 448 Pfam Transmembrane amino acid transporter protein 37 432 IPR013057 -
Phco3g01687 448 FunFam Lysine histidine transporter 1 33 443 - -
Phco3g01687 448 PANTHER OS05G0424000 PROTEIN-RELATED 35 433 - -
Phco3g01687 448 Gene3D Amino acid/polyamine transporter I 33 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01687 Phco-Chr3 28335642 28340769 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01687 3 28335642 28340769 Phco3g01687 3 28335642 28340769 ECH
Phco11g01806 11 14424137 14428328 Phco3g01687 3 28335642 28340769 PCT
Phco3g01687 3 28335642 28340769 Phco11g01808 11 14451518 14455548 PCT