Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01445 ATGTTCGAGAAGCATGTGGTAGAAGTATCTGCCACGTCTGCAACAAAGATTCCACGTGGCGCTCCACCGAGGGCAAAGCGAGATCGCGCGCAATACCAACCTCTTATCAACAAAATTTTCTTCTTCTCTTCTTCTTGGTTCTCTTCTCTTCTTCACACCCACTCTCCTTTCTTCTCCGCCATGAATGCCATCGCTACTGCTTCAGCTCTCTCTCTTCCAATTTTCCTTAGAGCTTCCAAATTTGACACAAAAAGGGATTTGAAATGTAGATTTAAAGTGTTTGCTGTCTATGGAGAAGAAGACAAGAAAAATTCATGGGGTGCGCTTTTTGATGTTGAGGATCCAAGATCCAAGATTACACAGAATAAAGGGAAGGTTTTGGATATATATCAAGCCCTGGAAGTGGCAAGACATGATATTCAGTACTTAGATTGGCGAGCTCGGCAAGATGTGCTTACAATCATGCTCCTCCATGAAAAGGTGGTTGAAGTACTCAATCCTCTAGCTCGTGAATATAAATCAATTGGCACCTTGAAAAAGGAGCTAGCTGGGTTGCAGGATGAATTAGAACACGCACACAGACAGGTTCATATATCTGAAGCAAGGGTTACCACTGCTTTAGATAAGCTTGCTTACATGGAAGAATTGGTAAATGATAAGCTGTTGCAAGACAGAAGCACAGCTGAAATTTCCCAAACATCATCTTCTCCAAGTACATCTGCAAATTCTCTAGTTAAAGAAAAGAGAAGGCAGCCACGGAAAAACTTGAACGTATCAGGCCCAGTTCAGTCATACCATCCCCACTTGAAGAATTTCTGGTATCCTGTTGCTTTCTCTAGCAACCTAAAGGATGATACCATGATCCCAATAGAATGTTTTGAGGAACCATGGGTTATCTTCAGAGGGAAAGATGGAAAGCCTGGATGTGTCCAGAATACTTGTGCACACAGAGCCTGTCCTCTGCACCTTGGTTCAGTAAATGAGGGTCGTATCCAATGCCCCTACCATGGCTGGGAATATACCACTGATGGAAAATGCGAGAAAATGCCATCTACTCGACTTCTAAATGTGAAAATAAAGTCAGTTCCATGCTTTGAAAAGGAGGGAATGATCTGGATTTGGCCTGGCAATGATCCACCAACAGCTACCCTTCCATCTTTACTACCTCCTTCTGGATTTGAAATCCATGCTGAGATTGTGATGGAACTTCCAATCGAGCATGGTTTACTTTTGGACAATCTTTTGGATCTTGCCCATGCCCCTTTTACTCACACTTCAACATTCGCTAAAGGATGGAGTGTTCCCAGCTTGGTGAAATTTTTGACACCTGCATCTGGCCTGCAAGGATACTGGGACCCTTATCCTATTGATATGGAGTTTCGACCACCTTGCATGGTTCTATCAACCATTGGAATTTCAAAGCCTGGGAAACTGGAGGGACAAAACACCAGGGAATGTTCAACGCACCTGCACCAACTTCATGTCTGTTTACCATCTTCAAAACAAAAGACAAGATTGCTATATAGAATGTCACTGGATTTCGCTCCTCTGCTTAAGCATATACCTTTAATGCAATACCTATGGAGGCATTTCGCAGAACAGGTTTTAAATGAGGATCTGCGGCTAGTGGTGGGGCAGCAGGAACGAATGAACAATGGTGCAAATGTATGGAATTTTCCAGTATCCTATGACAAGCTTGGGGTGAGATACAGATTGTGGAGAGATGCATTAGAGCGAGGAGATAAAGAACTACCATTCACCTCCTAG 1767 0.4324 MFEKHVVEVSATSATKIPRGAPPRAKRDRAQYQPLINKIFFFSSSWFSSLLHTHSPFFSAMNAIATASALSLPIFLRASKFDTKRDLKCRFKVFAVYGEEDKKNSWGALFDVEDPRSKITQNKGKVLDIYQALEVARHDIQYLDWRARQDVLTIMLLHEKVVEVLNPLAREYKSIGTLKKELAGLQDELEHAHRQVHISEARVTTALDKLAYMEELVNDKLLQDRSTAEISQTSSSPSTSANSLVKEKRRQPRKNLNVSGPVQSYHPHLKNFWYPVAFSSNLKDDTMIPIECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYTTDGKCEKMPSTRLLNVKIKSVPCFEKEGMIWIWPGNDPPTATLPSLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRECSTHLHQLHVCLPSSKQKTRLLYRMSLDFAPLLKHIPLMQYLWRHFAEQVLNEDLRLVVGQQERMNNGANVWNFPVSYDKLGVRYRLWRDALERGDKELPFTS 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01445 588 Gene3D - 267 389 IPR036922 GO:0051537
Phco3g01445 588 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 273 373 IPR017941 GO:0051537
Phco3g01445 588 Pfam Rieske [2Fe-2S] domain 273 354 IPR017941 GO:0051537
Phco3g01445 588 MobiDBLite consensus disorder prediction 227 262 - -
Phco3g01445 588 SUPERFAMILY ISP domain 268 378 IPR036922 GO:0051537
Phco3g01445 588 Coils Coil 175 202 - -
Phco3g01445 588 MobiDBLite consensus disorder prediction 227 245 - -
Phco3g01445 588 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 160 579 - -
Phco3g01445 588 Pfam Pheophorbide a oxygenase 460 555 IPR013626 GO:0010277
Phco3g01445 588 SUPERFAMILY Bet v1-like 369 579 - -
Phco3g01445 588 CDD Rieske_RO_Alpha_Cao 256 384 - -
Phco3g01445 588 ProSitePatterns Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 314 336 IPR015881 GO:0005506|GO:0051537
Phco3g01445 588 Gene3D - 396 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01445 Phco-Chr3 15425787 15431866 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01445 3 15425787 15431866 Phco3g01445 3 15425787 15431866 ECH