Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01444 ATGCATCATTGGGTAGCAAAGAAGGACAAAAATAATAACAACAATGTACTAATTGGATTCCTCATAAAGCTATGTTGGGTTGCTTCACTTGGCCTTTCTGGTCAGAGGGAATTGGGTAATACGCTTATGTCTTTTAATCGGTTTTGTGCTGCCAGCTACTGTTTTATTATCACGGCTAACGTTAGATTGTTAGACTCAATGATGGATAAGAAGAGATGGCTATGGAAGAGGAAGTCTTCTGAGAAGAGCCCTGGTGAAACTGAAAGTTCAGGATCTGTTTCTTCTCATTCCGAGAGGTACTCAGATGAACAGGAGGCATTGAAGGAATCTCCTAGTAGAAGCAATCATTCACCTGATGTCACATCAAAAGCTACTGTCTATGCAGAAGAAGTTGACCATAGTTCATTTATCTATGAACAATTGCCTGAAGAAGTCACCTCTAAAACTGTACCAGGTACAGGCATTGCAAGTGATGGTTCATCAGAGAAGGACGAAAAGGAAGAAAATGAAAACATAAAAGATGTAAAGGAAGATGTTCTAAATGATGGGTTGAGGAACATGTCAGAGAAGCTATCTGCTGCACTAGTGAATGTCAATGCCAAAGAGGACTTGGTTAAGCAGCATGCCAAAGTTGCTGAAGAAGCTATTGCAGGCTGGGAAAAGGCTGAAAATGAAGTGGCAGTTTTAAAGAAGCAACTTGACACAGTCATTCTCAGGAATTCAGTTTTGGAAGATCGCGTCACTCATCTAGACGGAGCACTTAAGGAGTGTGTTAGGCAGCTAAGACAGACAAGAGAAGAGCAGGAAGAGAATATTTATGATGCTGTAGCAAAAAAGACAAAAGAATTGGAATCAGCCAAAATTAAACTTGAGAGCAAACTCACTGAGCTCCAAAAAAAATTAGATGCTTCTGAGGCCAAGTCTTCTGTTGACTTTGATATGTATCGAAAGATAGAATGTTTGGAGAAAGAGAACTTGGCCCTCAAGCATGAGATTCTTGTTCAATCAGAAGAGTTGGAAATCAGGACAATCGAGAGGGATCTAAGCACTCAAGCTGCTGAGACAGCTAGCAAGCAGCATTTGGAAAACATCAAGAAAGTAGCCAAGCTTGAAGCTGAATGCCGGAGATTGAGGAGTGTGGCTTCAAGAGCTTCCTTAGTTAATGATCATAAATCAATTGTTCAGTCCTCATTCAGTGTTGAATCTGTAACAGATAGTCAATCAGACAGTGCAGAGCGGCATACTGCAGTGGAAATTGAATCTCACAAGATGAATGGCTCAGAACCAAACAAGTCTGAGCCAAGTTGTTCTGACTCGTGGGCATCTGCACTAATTGCTGAGCTTGATCAGTTCAAGAATGAAAAGTGCAGACAAACTCCATCCGCTTCTGTTAAACTTGATCTCATGGACGATTTTCTTGAAATGGAACGACTTGTTGCATTGCCTGAAACTAAGAAGGAAAGCTTGGTTCAAGAGTCAGTTGTTACCAATCAATGCATAAACAAAGAAAGCTCTCTCAGCATAGAGTTTGAGATCATGAATCAGCACATGGATGAGTTAAAAGTGAAGTTAGAGAAGGTGGAAGCTGATAAAGCTGAACTAGAGATAGCTTTGATGAAAAGTGAAGAGTATATCGAGGAATCACAACTTCAGTTGAGGGACGCAGGAGAGAAATTGGAGGAGTTGCAAAGAGAGCTAGAAAATGCCTACAATTCAAAGCAAAGGGTAGAAGATCACCTACTGGACATAGTGGCTGAGGCTCAAACATTATCTGTGAAGATTGAATTCTTAGAATCTGAGGTTGATAAGGAGAGAGCTGTGTCAAGTGAGATTGCAATGAAGTTTAGGGACTTGGAGGAAGAGTTGGAAAGAAAATCTCAAGAGGTTGACTCATTAGAAGCAGAGCTTGATAAGAAGAAGGATGTGTCAAATAAAATTGCAATGAAGTGTAAGGACCTGGAGAAAGAGCTAGAAAGTAAATCCGACAAGGTTGACTTGTTAGAAGCGGAGGTTGCTAAGGAAAGGGAGGAATCAGATAAAATTGCCAAAAATTTTAAGGACCTGGAGGAAGTGCTAGATAGCAAATCTGCAAAGGTTGACATATTAGAAGCAGAAGTTGCTAAGGAGAGGGATGTGTCTGATAAGATTGCAAAAAAGTGTAAGGACCTGGAGGAAGTGCTAGAGAGCAAATCTGCAAAGGTTGAGTTATTAGAAGCAGAAGTTGATAAAGAGAGGTCTTTGTCAGATAAAATTTCAATGAATTGCAAGGAGCTGGAGGAGAAGCTAGAAAGGAAATCTGCAAAGGTTGACTTGTTAGAAGAAGAGGTTCATAAGGAGAGGACTACTTCAAAAGAAATTGCGATGAAGTGTAGGGAATTGGAGGAAGAATTGCTCAGGTCAACAGCTAGCTCGTATGGAGAAAAGAAGATTAAGCAGGAGGACCTAACACTGGCTGCTGGAAAGCTTGCTGAGTGCCAGAAAACAATAGCATCTTTGGGAAATCAGTTGAAATCCCTGGCTACACTGGAAGATTTCCTTATTGACACTGCAAGCATTCCTGCTAGTCCATCACTCACTCCTCAGGCTCAGGCTGGTGGGGAGATGTGGAAGTTTCATTCCAATGGCACATTTTCACCTAAAAGAGATTCCATTTCTTCAAGGTTGGCTGATGGTAACTCTTGTCCATCCTTAAACAAAAATGAGGAGACCTCACCGTTTTCATCATCTTCATCAACATCATCACCAGCCATGCCAAATCATGTCAGTTCTGAGAGGAGTAGAAATGGCTTTGCAAAATTTTTCTCCAGAACCAAGAGTGGGATCCGGCTAGAAATTTAG 2838 0.4109 MHHWVAKKDKNNNNNVLIGFLIKLCWVASLGLSGQRELGNTLMSFNRFCAASYCFIITANVRLLDSMMDKKRWLWKRKSSEKSPGETESSGSVSSHSERYSDEQEALKESPSRSNHSPDVTSKATVYAEEVDHSSFIYEQLPEEVTSKTVPGTGIASDGSSEKDEKEENENIKDVKEDVLNDGLRNMSEKLSAALVNVNAKEDLVKQHAKVAEEAIAGWEKAENEVAVLKKQLDTVILRNSVLEDRVTHLDGALKECVRQLRQTREEQEENIYDAVAKKTKELESAKIKLESKLTELQKKLDASEAKSSVDFDMYRKIECLEKENLALKHEILVQSEELEIRTIERDLSTQAAETASKQHLENIKKVAKLEAECRRLRSVASRASLVNDHKSIVQSSFSVESVTDSQSDSAERHTAVEIESHKMNGSEPNKSEPSCSDSWASALIAELDQFKNEKCRQTPSASVKLDLMDDFLEMERLVALPETKKESLVQESVVTNQCINKESSLSIEFEIMNQHMDELKVKLEKVEADKAELEIALMKSEEYIEESQLQLRDAGEKLEELQRELENAYNSKQRVEDHLLDIVAEAQTLSVKIEFLESEVDKERAVSSEIAMKFRDLEEELERKSQEVDSLEAELDKKKDVSNKIAMKCKDLEKELESKSDKVDLLEAEVAKEREESDKIAKNFKDLEEVLDSKSAKVDILEAEVAKERDVSDKIAKKCKDLEEVLESKSAKVELLEAEVDKERSLSDKISMNCKELEEKLERKSAKVDLLEEEVHKERTTSKEIAMKCRELEEELLRSTASSYGEKKIKQEDLTLAAGKLAECQKTIASLGNQLKSLATLEDFLIDTASIPASPSLTPQAQAGGEMWKFHSNGTFSPKRDSISSRLADGNSCPSLNKNEETSPFSSSSSTSSPAMPNHVSSERSRNGFAKFFSRTKSGIRLEI 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01444 945 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 68 629 - -
Phco3g01444 945 Coils Coil 318 338 - -
Phco3g01444 945 MobiDBLite consensus disorder prediction 869 929 - -
Phco3g01444 945 MobiDBLite consensus disorder prediction 147 171 - -
Phco3g01444 945 Coils Coil 650 705 - -
Phco3g01444 945 Coils Coil 510 579 - -
Phco3g01444 945 Pfam Filament-like plant protein, long coiled-coil 735 841 IPR008587 -
Phco3g01444 945 Pfam Filament-like plant protein, long coiled-coil 403 494 IPR008587 -
Phco3g01444 945 Pfam Filament-like plant protein, long coiled-coil 201 307 IPR008587 -
Phco3g01444 945 Pfam Filament-like plant protein, long coiled-coil 314 380 IPR008587 -
Phco3g01444 945 Coils Coil 720 782 - -
Phco3g01444 945 Coils Coil 608 642 - -
Phco3g01444 945 MobiDBLite consensus disorder prediction 98 112 - -
Phco3g01444 945 Coils Coil 258 307 - -
Phco3g01444 945 SUPERFAMILY Tropomyosin 629 841 - -
Phco3g01444 945 MobiDBLite consensus disorder prediction 876 929 - -
Phco3g01444 945 MobiDBLite consensus disorder prediction 76 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01444 Phco-Chr3 15412761 15419467 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01444 3 15412761 15419467 Phco3g01444 3 15412761 15419467 ECH