Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01420 ATGAATCCCTACATTTTCGGAGTCATACTCCCTCTCCTCGTCACGCTTCTCGTCCGCAACAAGAATCCTCGCAAACGACGCGGCGTTCCGCTCCAAACCGGAGACAAGGCCGGTCTGACCATCCGCAACAGCCGCTTCGAGTCCCCGGTCCAGAGTGCGTGGGAAGGCGTCGCCACGCTCGCGGAGCTCTTCGAAGAGGCGTGCAAAACGCACGCGGAGAGGGTCCTCCTCGGCACGCGCGTGGTGCTGGCGAGGGAAATGGAGAGCGGACATGACGGCAGGTCGTTCGAGAAGCTTCACTTGGGAGACTACGGCTGGCTCTCCTACGCCACTGTCTTCGATGTCGTTTCGAGCTTTGCCTCGGGGTTGGCCTTCCTCGGACATGCCAGGGAGGAACGCGCCGCCATCTTCGCTGACACGCGCCAAGAGTGGTTTATGGCGCTTCAGGGTTGTTTCAGGCGAAATGTGACAGTTGTGACTATATATGCATCATTGGGAGAGGAAGCTTTATCTTACTCCTTGAATGAGACAGAGGTTACAACAGTGATTTGTGGACGAAAAGAATTGAAAACACTAGTAAATATAAGTGGACAACTTGATTCAGTGAAACGTGTGATTTGCATGGACGATGATATCCCATCTGATGCCTCTTCTATTGCATATAACTGGACAATCACTTCGTTCGCTGATGTTGAGAGACTTGGCAAAGAAAACCCTGTTGAAGCTGATTTACCTCTTTCCGCAGATGTTGCAGTTATAATGTATACAAGTGGAAGTACAGGATTACCCAAGGGTGTGATGATGACACATGGGAATGTCTTAGCTACACTCTCTGCTGTGATGACCATTATTCCTGATATTGGGACTAAGGATATCTATCTTGCATACTTACCGATGGCTCATATCTTAGAATTAGCAGCTGAGAGTTTGATGGCAGCTGTAGGAGTTCCTATAGGATATGGATTTCCTTTGACCCTTACTGACACATCAAACAAGATTAAAAAAGGAACAAAGGGGGATGCTAGTGCACTGGGTCCAACTTTAATGGCAGCTGTACCGGCAATTCTTGATCGTGTTCGTGATGGAGTGTTCAAGAAGGTAAATGCAACAGGAGGATTGCCAAAGAAATTGTTTTATTTAGCCTATGCCCGGAGGTTGCAAGCAGTTAATGGTAGTTGGCTTGGAGCTTGGGGTTTGGAAAAGGCTCTTTGGGATTTTCTTGTGTTCAAAAAGGTCCGAGCTATTTTGGGCGGCCGTATCCGTTTTATACTATCAGGCGGCGCTCCTCTTTCTGGTGATACCCAGAAGTTCATCAACATTTGTCTCGGTGCTCCAATCGGTCAAGGATATGGTCTTACAGAGACTTGTGCTGGTGGGACATTCTCTGATGTTGATGATACTTCTGTTGGTCGTGTTGGAGCACCTCTTCCGTGCTCATTTATTAAGCTAATCGACTGGCCTGAAGGTGGATATTTAACAAATGACTCACCAATGCCCCGTGGAGAAATTGTGATTGGTGGTCCAAATGTCACTCTCGGGTATTTCAAAAATGAAGAAAAAACAAATGAATCATACAAGGTTGATGAAAGAGGAATGAGGTGGTTTTACACTGGTGACATTGGGAGATTTCATCCAGATGGATGCCTTGAAATCATTGACCGTAAAAAGGACATTGTTAAACTGCAGCATGGAGAATATGTCTCCTTGGGAAAGGTTGAGGCAGCTCTTATTGTTAGCCCCTTTGTGGACAATATTATGGTTCATGCTGATCCTTTCCACAGTTACTGTGTGGCACTTGTGGTGGGTTCTCAGTTTTCATTGGAGGAATGGGCTTCAGAACAAGGAATTTCATATATCAATTTTTCAGATCTGTGTGCAAAAGAAGAAACTGTGAAGGAGGTGCATGCATCACTTGTAAAGGAGGGAAAGAAGGCTCATCTGGAGAAATTTGAGATTCCTGCAAAAATTAAATTGCTTTCTGACCCATGGACCCCTGAGTCTAGCCTTGTCACAGCTGCTCTCAAACTCAAGAGAGAGGCCATAAAAAAGACGTTTGATGAAGAACTTTCAAAGTTGTATGCTTCATAG 2088 0.4626 MNPYIFGVILPLLVTLLVRNKNPRKRRGVPLQTGDKAGLTIRNSRFESPVQSAWEGVATLAELFEEACKTHAERVLLGTRVVLAREMESGHDGRSFEKLHLGDYGWLSYATVFDVVSSFASGLAFLGHAREERAAIFADTRQEWFMALQGCFRRNVTVVTIYASLGEEALSYSLNETEVTTVICGRKELKTLVNISGQLDSVKRVICMDDDIPSDASSIAYNWTITSFADVERLGKENPVEADLPLSADVAVIMYTSGSTGLPKGVMMTHGNVLATLSAVMTIIPDIGTKDIYLAYLPMAHILELAAESLMAAVGVPIGYGFPLTLTDTSNKIKKGTKGDASALGPTLMAAVPAILDRVRDGVFKKVNATGGLPKKLFYLAYARRLQAVNGSWLGAWGLEKALWDFLVFKKVRAILGGRIRFILSGGAPLSGDTQKFINICLGAPIGQGYGLTETCAGGTFSDVDDTSVGRVGAPLPCSFIKLIDWPEGGYLTNDSPMPRGEIVIGGPNVTLGYFKNEEKTNESYKVDERGMRWFYTGDIGRFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIVSPFVDNIMVHADPFHSYCVALVVGSQFSLEEWASEQGISYINFSDLCAKEETVKEVHASLVKEGKKAHLEKFEIPAKIKLLSDPWTPESSLVTAALKLKREAIKKTFDEELSKLYAS 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01420 695 ProSitePatterns Putative AMP-binding domain signature. 253 264 IPR020845 -
Phco3g01420 695 Gene3D - 48 554 IPR042099 -
Phco3g01420 695 SUPERFAMILY Acetyl-CoA synthetase-like 56 693 - -
Phco3g01420 695 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 42 693 - -
Phco3g01420 695 Pfam AMP-binding enzyme 102 562 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01420 Phco-Chr3 14807823 14817637 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01420 3 14807823 14817637 Phco3g01420 3 14807823 14817637 ECH