Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01416 ATGGACGAATCCTCGCTGCAATTCGTCTCCGAAATCGGAAGACACCTCGCTCAGCGAACTCGTCACAGCAAAGACTTCATCGTCAAATCCCTCGGAAAGGCAGCAAATGCTTTGTCTCAGATAAAACAGTCTCCTCAACCACGGACGGCGAAGGAATTACAAGCTGCTAAGAAACAAGAAGATGCTCTGAAGCCCCTGTCAAATGCTGTCGTCTGTAGTGGTCTGCTTCAACATGCAGATAAGGAAGTTAGACTTGTGGTTGCTACGTGTGTCACCGAGCTCTTTAGACTTATGGCACCTGAACCGCCTTTTAAAGACAAGCATTTGAGGGATGTATTTAAACTTATCATTAATTTGTTTGAGGATCTAGCTGACACTGCAAGTCCATTCTTTTCGAAAAGGGTTAAAGTATTGGAGATAATGGCTCAATTAAAGTGTTGTGTGTTAATGCTGGAGATTAACTGCCTGGACCTAGTTCTTGAGATGTTCAATATTTTCTTCTCAGTTGTGAGAGATGAACTTCTCACTAGTGCCATGACTTCTATAATGATAAACATTTTGTATGATAGTGAGGAGGCTTTTCAGCTACTATTAGGAGTGGTTTTACAAAATCTTGTTAAGAAAAAGGGGGATGCAAATTTTGCTGCTGAAAAGCTTGCTGCATCAGTCATCAAAACTTGTGCTCAAGAGGATGAGCTAAACCTCCTAGTTTGTGGTTTTTTAGCTTCTTGTATACACGACAGAGATGCTATGGGCAGTGGGCTTAAACAATATTACTATGAAATTTTCTCAAAAGTTTTCGACTGTGCGCCTGAGATGCTTCATTCTGTCATCCCAAGTTTAATCAAAGAATTATCGGCTGATGAGGTTGATGTTCGGATAAAAGCTGTAAATTTGGTGGGGAAGCTTTTTGCACTTCAACATCGTGTTGCTCAGAAGTATCGTGATCTTTTTGTGGAGTTTTTGAAAAGATTTTCTGATAAATCTGTGGATGTTAGGATTAGTGCTCTACTATGTGCTAAAGTTTTCTATTTAGCAAATCCCTATAATAGTACAGAATCACGTGAAATTATGACTTCTGTTGAAGATCGATTGTTAGACTCTGATGAACAAGTGAGAAAGCAGGCAGTCTTTGTCGCCTGTGATATTTTTAGCTCAAACCTGAAACTTGTTTCATCCAAACTACTATCTCAAGCCACCGAAAGACTTCGGGATATAAAGGCATGTGCTGTTGAATTTTGTTTGCTTTCTGAAGGAAAAAATAGGGACAATATAGAATTCCTAATAATTTGTAGCATGAAAGTTAGTAATCACTTTGAAGAGATTCCCTGTAAAATTATGATGCTGTGCTATGATAAAGATTGTAAGGAGTTCAGGTTCCAAAACATGGAATTTGTTCTTGCTGATGATCTATTCCCCGAGGATCTTCCGATTGAGGAAAGGACAAACCATTGGATACACATGTTTTCTCTTTTCAGTTTTCCTCATGAAAAGGCGCTGGATACTATTTTGGCTCAAAAGAGAAGGTTCCAAAATGAAATGAAAAACTATTTGACTATGCGGAAGAAAATGAAGGCTATTGTTCGATATTTCCCCTCTATGGTGAAAGGCTTGGAAAAACAGTTCTTATTGTTGTTGGAACAGAAAAGTCCTGTTAATGACAAGCTGATTGAAGTTATAGCAAAGGCAGGCTGTCATATGTCTTTCAATCACAGTGATATTTATCCACTTTTAAGGAGACTTTGCTTGGATGGAACACGCAGACAGGCCAAATTTGCGGGGTCTGCGATTGTTGCTTTAAGTTCTGAACAATCAGTTTTTAGAGAGTTATATGAGGAGCTAACTGATTCTTTATATAGTGAGCGGAATGTCCCTACTATTTTGCAATCTCTGGGATGCATTACACAGTATGTTTCCAATTTTGAAACTCGAGTTGAAGAGATCACGTCATATATATTCCAGAAGATCATTCAAATGGAGCATTTGGATGATGGTCATTATGCGACATCCTTGGGTGACACTGCCCAATGTAGCGAATTTTGTCAATTGAAGATTTATGGGCTGAAAACATTGGTGAAGGTTTCTTTGCATTATGAAGGAAGTCATGTTAAGCGCAATATTAATGGATTGTTAGACATTTTGTCAAGAATGCTACAAGAAAGTGATAATTTCGTTAATATAACTGCTAGCTCCTGTGAAAATGATAAGGCTCATATTAGATTAGCTGCGGCAAAGGCAATCCTTCGTCTTGCTAGGAAGTGGGATTTACATATTACTCCTCAGACTTTTCAGTTTTGTATATTGATTGCAAAGGACTCTTCTTTGTTTGTTAGGAGCGCATTTCTTTGTAAGACCCAAAAGTTGTTGAAAGAGCATAAATTACCAATTAGATTTGCTTGTGCTTTTGCTTTGGCAGCAACAAATGGTACTGGCAATCAGCAATATCAGATATCTGGTACCAACTTTGTGATCGAGGATCATTTTACGTCTCCCCTCCGTATTGTGGACGTGTTTCTCACTTCAACTCTAGTTTTCTCTCTCCTCGATATGACTATGGCAACATCAAATGTTGCTCGAGATGAATATGAATAA 2592 0.3858 MDESSLQFVSEIGRHLAQRTRHSKDFIVKSLGKAANALSQIKQSPQPRTAKELQAAKKQEDALKPLSNAVVCSGLLQHADKEVRLVVATCVTELFRLMAPEPPFKDKHLRDVFKLIINLFEDLADTASPFFSKRVKVLEIMAQLKCCVLMLEINCLDLVLEMFNIFFSVVRDELLTSAMTSIMINILYDSEEAFQLLLGVVLQNLVKKKGDANFAAEKLAASVIKTCAQEDELNLLVCGFLASCIHDRDAMGSGLKQYYYEIFSKVFDCAPEMLHSVIPSLIKELSADEVDVRIKAVNLVGKLFALQHRVAQKYRDLFVEFLKRFSDKSVDVRISALLCAKVFYLANPYNSTESREIMTSVEDRLLDSDEQVRKQAVFVACDIFSSNLKLVSSKLLSQATERLRDIKACAVEFCLLSEGKNRDNIEFLIICSMKVSNHFEEIPCKIMMLCYDKDCKEFRFQNMEFVLADDLFPEDLPIEERTNHWIHMFSLFSFPHEKALDTILAQKRRFQNEMKNYLTMRKKMKAIVRYFPSMVKGLEKQFLLLLEQKSPVNDKLIEVIAKAGCHMSFNHSDIYPLLRRLCLDGTRRQAKFAGSAIVALSSEQSVFRELYEELTDSLYSERNVPTILQSLGCITQYVSNFETRVEEITSYIFQKIIQMEHLDDGHYATSLGDTAQCSEFCQLKIYGLKTLVKVSLHYEGSHVKRNINGLLDILSRMLQESDNFVNITASSCENDKAHIRLAAAKAILRLARKWDLHITPQTFQFCILIAKDSSLFVRSAFLCKTQKLLKEHKLPIRFACAFALAATNGTGNQQYQISGTNFVIEDHFTSPLRIVDVFLTSTLVFSLLDMTMATSNVARDEYE 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01416 863 Pfam Sister chromatid cohesion protein PDS5 protein 25 525 - -
Phco3g01416 863 SUPERFAMILY ARM repeat 75 790 IPR016024 -
Phco3g01416 863 Gene3D - 213 434 IPR011989 -
Phco3g01416 863 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 9 811 IPR039776 GO:0007064
Phco3g01416 863 CDD PDS5 27 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01416 Phco-Chr3 14680983 14699669 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01416 3 14680983 14699669 Phco3g01416 3 14680983 14699669 ECH