Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01385 ATGGCATTCTACCCTCAGACCATCTTTCCAATCACTTTCCTTCTTGCACTTTTTTTATCAGGGCAAAAACCATGCGAGTGCGCCAGAGTTTTCACCATCGTCAACTACTGCAAGGAGACGCTGTGGCCGGCGGTGACGCCGGGAGAAAAGTTCAACGGCGGCGGTTTCGTCCTAAAACCGGGCCAATCCGAGGTGTTCACCGCCCCGGTCAGTTGGAGCGGCCGCATTTGGGCCCGAACCGGTTGCAAATTCGACCAAAACGGAAACGGGCAGTGCCAAACCGGTTCATGCGGCACCACGCTCAAATGTGGGGCCTCGGGTAAAACGCCCGCTTCACTCGCGGAATTCACACTCGCTCAACCGGACTTCTACGACGTTAGCCTGGTGGACGGCTTCAACGTCCCCATCGCCGTTAGGCCAATTAACGGAAAGGGAAACTGCTCCTCAGCGGGGTGCGACTCCGACCTGAGAGCGACTTGCCCTAACGAACTCGCCCTTAAGGCTAACGGCAAGACCATTGGGTGCCGTAGCGCGTGTGACGTGTTTAACACGGACGAGTATTGCTGCAGAGGAAATTATGGAAACCCCTCCACTTGCAAACCCACATTTTATTCCAAGAAGTTTAAGGAGGCTTGTCCCACTTCTTATAGTTATGCCTACGATGATCCAACCAGCATCTTCACTTGTTCAGGCACTGATTATGTCATTGCCTTCTGCTCCTCCAGGAAACGACAAGTATGCACTTACCATAACAACAAGCTTCACTGCAGTGGATCACAAGGGTTGAAATCGTTGATTGGAAGGTGGTGCATCGTAATCATAACTCTGTTTTCGGTTCTTAGTTTATGGAATGGATTCTAG 861 0.518 MAFYPQTIFPITFLLALFLSGQKPCECARVFTIVNYCKETLWPAVTPGEKFNGGGFVLKPGQSEVFTAPVSWSGRIWARTGCKFDQNGNGQCQTGSCGTTLKCGASGKTPASLAEFTLAQPDFYDVSLVDGFNVPIAVRPINGKGNCSSAGCDSDLRATCPNELALKANGKTIGCRSACDVFNTDEYCCRGNYGNPSTCKPTFYSKKFKEACPTSYSYAYDDPTSIFTCSGTDYVIAFCSSRKRQVCTYHNNKLHCSGSQGLKSLIGRWCIVIITLFSVLSLWNGF 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01385 286 PIRSF PR5 2 280 IPR001938 -
Phco3g01385 286 ProSiteProfiles Thaumatin family profile. 28 239 IPR001938 -
Phco3g01385 286 FunFam Thaumatin-like protein 1a 29 240 - -
Phco3g01385 286 Gene3D Thaumatin 30 239 IPR037176 -
Phco3g01385 286 SUPERFAMILY Osmotin, thaumatin-like protein 30 240 IPR037176 -
Phco3g01385 286 SMART tha2 31 240 IPR001938 -
Phco3g01385 286 PRINTS Pathogenesis-related protein signature 230 239 IPR001938 -
Phco3g01385 286 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Phco3g01385 286 PRINTS Pathogenesis-related protein signature 122 138 IPR001938 -
Phco3g01385 286 PRINTS Pathogenesis-related protein signature 54 63 IPR001938 -
Phco3g01385 286 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Phco3g01385 286 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Phco3g01385 286 PANTHER OS03G0233200 PROTEIN 14 239 IPR001938 -
Phco3g01385 286 CDD TLP-PA 30 239 - -
Phco3g01385 286 Pfam Thaumatin family 35 239 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01385 Phco-Chr3 14048797 14050565 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01385 3 14048797 14050565 Phco3g01385 3 14048797 14050565 ECH