Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01378 ATGCGTGAAGCACTAGCGTACGATATCGCCGGCGCGGCGCTTTCTCCGACGCCACCGGTGGTTGCGGCGGGGCGGAGCCGTTCGCAGGGATTTCCGCGGCGAGTGACGCCCGAGACGCTGCCTCCGGCGCCGGTGTCTGGATCGGCGGTAGAGCGCGTTCTCCCGAACGGCGACTTCTACGCCGGAAGCTTCTCCGGCAACGTGCCTCACGGATCGGGGAAGTACCTGTGGACGGACGGATGCATGTACGAGGGGGAGTGGAAGCGGGGAAAGGCCTCCGGCAAGGGGAAATTCTCGTGGCCCTCGGGCGCGACCTATGAGGGTCAGTTCAAATCGGGTCGAATGGAAGGGTTTGGAACCTTCGTCGGATCCGACGGAGACACCTACCGTGGGTCTTGGATCTCCGACCGGAAACACGGGTTCGGGCAGAAGCGCTACGCGAACGGGGACTTATACGAAGGGTGGTGGAAGCGCAACGTGCAAGACGGTCACGGCCGTTATGTTTGGAAGAACGGGAACGAATACGTCGGGGAATGGAAGAACGGCGTGATTAACGGCAAGGGCACTCTGGTGTGGGCGAACGGGAACCGTTACGAGGGGCAGTGGGAGAACGGGGTCCCTAAGGGTCACGGCGTTATGAAGATTCACCACCGTTTGCTCTGGGGCGAGAATTTCAGTGTGAAACGTTTCTCCGTTGACGGAAGAGGGAGCGTGAATAATGACAAGAGTTTCCCCAGGATTTGCATCTGGGAGTCGGAGGGTGAAGCGGGAGACATCACGTGTGATATTATCGATAATGTGGAAGCTTCCATGTTTTACCGCGACGGAACGACCTCAGATTGTGAAGATTTGAGAAGGAACCCTTGTTGTTTCGCGAGCGAAGTGAAGAGACCCGGGGAAACAATTTCCAAAGGGCATAAGAATTATGATTTGATGCTTAATCTGCAATTGGGGATAAGGTACTCTGTTGGTAAGGAGGCTTCCACTTCGCGGGAGCTTAAGCAGAGTGATTTTGATCCGAAGGAGAAGTTCTGGACTAGGTTTCCCTCTGAGGGGTCCAAGATTACGCCGCCGCATCAGTCCGCCGAGTATCGATGGAAGGATTATTGTCCGGTGGTTTTTAGGCATTTGAGAAAGCTGTTTCAGGTGGATCCTGCTGACTACATGTTGGCTATATGTGGGGATGATGCTCTTCGGGAGCTTTCTTCTCCTGGGAAAAGTGGAAGCATCTTCTACTTGACCCAGGATGATAGATTCATGATAAAGACGGTGAAGAAATCTGAAGTCAAGGTGCTTCTTCGGATGCTTCGAAGTTATTATCAACATGTATCTCGATATGAGAATTCACTTGTGACCAAATTCTATGGGGTGCACTGTGTTAAGCCAATTGGAGGCCAGAAGATCCGGTTCATTGTGATGGGCAATCTTTTTTGTTCCGAATATCCAATTCATAGACGATTTGATTTGAAAGGATCTTCACATGGCCGCACCACAGATAAACCTGAGGAGGACATTGATGAAACAACCACCCTAAAGGACCTTGATCTAAACTTTGCGTTTCGTGTACAGAGAAATTGGTTTCAGGAACTCATCAAACAAATTGAGCTGGACTGTGAGTTCTTGGAAGCCGAGAAAATTATGGATTACAGTCTTTTAGTTGGCATTCATTTTCGTGATGATAATACATGTGACAAAATGGGGCTGTCACCTTTTCTCCTGCGCACTGGCAATAGGGATACTTATCAGAATGAAAAGTTCATGCGTGGTTATCGCTTTCTTGAAGCAGAGCTACATGATAAAGATCGAGTTAAATCTGGAAGGAAATCATTGATCAGGCTAGGAGCCAATATGCCTGCAAGAGCGGAGCGAATAGTACGGAGGAGTGACTTCGATCAGTACACCACTGTTGGAATCAGCCATTTGACCCCTTATCGGAGTGGGGAGACTTACGATGTGATTCTATATTTTGGGATTATTGACATTTTGCAAGATTATGATATCAGCAAGAAGCTTGAGCATGCTTACAAGTCATTGCAAGTTGACTCTTCTTCAATTTCTGCTGTTGATCCAAAGCTCTACTCGAAAAGGTTTCGCGATTTTGTAGGGAGAATTTTCATCGAAGAGAGGTAG 2130 0.4962 MREALAYDIAGAALSPTPPVVAAGRSRSQGFPRRVTPETLPPAPVSGSAVERVLPNGDFYAGSFSGNVPHGSGKYLWTDGCMYEGEWKRGKASGKGKFSWPSGATYEGQFKSGRMEGFGTFVGSDGDTYRGSWISDRKHGFGQKRYANGDLYEGWWKRNVQDGHGRYVWKNGNEYVGEWKNGVINGKGTLVWANGNRYEGQWENGVPKGHGVMKIHHRLLWGENFSVKRFSVDGRGSVNNDKSFPRICIWESEGEAGDITCDIIDNVEASMFYRDGTTSDCEDLRRNPCCFASEVKRPGETISKGHKNYDLMLNLQLGIRYSVGKEASTSRELKQSDFDPKEKFWTRFPSEGSKITPPHQSAEYRWKDYCPVVFRHLRKLFQVDPADYMLAICGDDALRELSSPGKSGSIFYLTQDDRFMIKTVKKSEVKVLLRMLRSYYQHVSRYENSLVTKFYGVHCVKPIGGQKIRFIVMGNLFCSEYPIHRRFDLKGSSHGRTTDKPEEDIDETTTLKDLDLNFAFRVQRNWFQELIKQIELDCEFLEAEKIMDYSLLVGIHFRDDNTCDKMGLSPFLLRTGNRDTYQNEKFMRGYRFLEAELHDKDRVKSGRKSLIRLGANMPARAERIVRRSDFDQYTTVGISHLTPYRSGETYDVILYFGIIDILQDYDISKKLEHAYKSLQVDSSSISAVDPKLYSKRFRDFVGRIFIEER 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01378 709 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 393 703 IPR002498 GO:0016307|GO:0046488
Phco3g01378 709 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 294 475 IPR027484 -
Phco3g01378 709 SUPERFAMILY SAICAR synthase-like 304 705 - -
Phco3g01378 709 PIRSF PIP5K_plant 42 225 IPR017163 GO:0005524|GO:0016308
Phco3g01378 709 PIRSF PIP5K_plant 220 709 IPR017163 GO:0005524|GO:0016308
Phco3g01378 709 Gene3D - 62 112 - -
Phco3g01378 709 Gene3D - 113 157 - -
Phco3g01378 709 Gene3D - 158 219 - -
Phco3g01378 709 FunFam Phosphatidylinositol 4-phosphate 5-kinase 90 134 - -
Phco3g01378 709 MobiDBLite consensus disorder prediction 23 47 - -
Phco3g01378 709 Gene3D - 476 705 - -
Phco3g01378 709 FunFam Phosphatidylinositol 4-phosphate 5-kinase 294 475 - -
Phco3g01378 709 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 55 159 - -
Phco3g01378 709 SMART morn 150 171 IPR003409 -
Phco3g01378 709 SMART morn 196 217 IPR003409 -
Phco3g01378 709 SMART morn 58 79 IPR003409 -
Phco3g01378 709 SMART morn 173 194 IPR003409 -
Phco3g01378 709 SMART morn 127 148 IPR003409 -
Phco3g01378 709 SMART morn 81 102 IPR003409 -
Phco3g01378 709 SMART morn 104 125 IPR003409 -
Phco3g01378 709 CDD PIPKc_AtPIP5K_like 308 704 - -
Phco3g01378 709 SMART PIPK_2 334 706 IPR002498 GO:0016307|GO:0046488
Phco3g01378 709 Pfam MORN repeat 83 104 IPR003409 -
Phco3g01378 709 Pfam MORN repeat 60 82 IPR003409 -
Phco3g01378 709 Pfam MORN repeat 129 150 IPR003409 -
Phco3g01378 709 Pfam MORN repeat 106 128 IPR003409 -
Phco3g01378 709 Pfam MORN repeat 152 173 IPR003409 -
Phco3g01378 709 Pfam MORN repeat 198 213 IPR003409 -
Phco3g01378 709 Pfam MORN repeat 175 197 IPR003409 -
Phco3g01378 709 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 303 705 IPR002498 GO:0016307|GO:0046488
Phco3g01378 709 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 68 705 IPR023610 -
Phco3g01378 709 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 146 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01378 Phco-Chr3 13823186 13826823 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01378 3 13823186 13826823 Phco3g01378 3 13823186 13826823 ECH