Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01352 ATGAAGACTCGTGGTTCTACCAGGATCTCTGCAAAATGGGTTCCAATTTTCTCTGTATTTTCCTTCATTCTTGGAATGTTCATAACAACCAGGATGAGGGAGCCACTTGAGTCTAATGGGGTGCTTCTGTCAAATCATCGACGCGAGCAAGAACTGCAGGTGGTGTCAGGGGATTGTGCCACTAAAAAGGACAAGGATGTAATGAGTGAAGTGTACAAAACCCAAGAGGCCATTCAATCTCTAGACAAGCAAGTTTCCATACTTCAGATGGAGCTAGCAATAGCAAGGAGTACCAGAGAATCTGAGATCGCGGATGGTTCGGGTAAAACCTTGGCCTCAAGATCCTCCACTGAAGACCCTCCAAGGAAGAAGGTGTTTCTAGTGATTGGCATAAACACTGCTTTCAGTAGCAGGAAGCGGCGTGACTCGGTTAGAGAGACTTGGATGCCTCAAGGGGAACAGCTTCTTCAATTGGAACAAGAGAAGGGAATTGTCATCAGATTCATGATTGGTCACAGTGCAACTTCTAACAGCATTCTTGATCGAGCTATTGATTCAGAAGAAGCCCAGCACAAAGATTTCCTTCGCCTGGAACATGTTGAAGGGTATCATGAATTGTCTGCAAAGACAAAAGTTTTCTTTTCTACTGCAGTTGCAAAATGGGATGCTGATTTCTATGTCAAAGTGGATGATGATGTTCATGTCAATTTAGGTGTACTTGCAACAACCCTTACTCGTCATCGTTCAAAACCCAGGGTCTACATCGGATGTATGAAATCTGGACCTGTTCTTTCACGAAAGGATGTCAAGTATCATGAACCTGAGTTTTGGAAGTTTGGAGAAGAGGGTAACAAATACTTCCGACATGCAACTGGACAGATATATGCAATCTCTAAGGATCTAGCCACCTACATTTCCATTAACCAGCCAATATTGCACAAATATGCCAATGAAGATGTCTCACTTGGAGCATGGTTCATAGGTCTAGAAGTTGAGCACATAGATGACCGCAGCATGTGCTGTGGAACTCCTCCAGACTGTGAGTGGAAGGCAGAAGCAGGTAACATATGTGTTGCATCCTTTGACTGGAGCTGTAGTGGAATCTGCAAGTCAGTGGAGAAGATCAAATATGTGCACTCAAAGTGTGGTGAAGGGGATGGAGCTGTTTGGAGTGCTTTAGTTTAG 1185 0.4405 MKTRGSTRISAKWVPIFSVFSFILGMFITTRMREPLESNGVLLSNHRREQELQVVSGDCATKKDKDVMSEVYKTQEAIQSLDKQVSILQMELAIARSTRESEIADGSGKTLASRSSTEDPPRKKVFLVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEQEKGIVIRFMIGHSATSNSILDRAIDSEEAQHKDFLRLEHVEGYHELSAKTKVFFSTAVAKWDADFYVKVDDDVHVNLGVLATTLTRHRSKPRVYIGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKYANEDVSLGAWFIGLEVEHIDDRSMCCGTPPDCEWKAEAGNICVASFDWSCSGICKSVEKIKYVHSKCGEGDGAVWSALV 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01352 394 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 85 335 IPR002659 GO:0006486|GO:0016020|GO:0016758
Phco3g01352 394 Gene3D - 115 340 - -
Phco3g01352 394 FunFam Hexosyltransferase 119 340 - -
Phco3g01352 394 Pfam Domain of unknown function (DUF4094) 10 97 IPR025298 -
Phco3g01352 394 Pfam Galactosyltransferase 139 336 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01352 Phco-Chr3 13409000 13412629 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01352 3 13409000 13412629 Phco3g01352 3 13409000 13412629 ECH
Phco3g01352 3 13409000 13412629 Phco7g01191 7 10324797 10329349 PCT