Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01343 ATGGAAAAGAAAGAGTTAGAGGAGACAGATGAGCCAAGTCCTCGGGCTGTTGGAAAGATAGAATTGGATTCGAGTGAAGAAGATAGGGAAAAACACTCAGTGCGGCCAGAAACTCAAAATGTAGACTATGATACCTCTGAGTTCGGGAATGATCAAGAAGATGTACCGTACAATATATGTTCTCAAGATGTTGAAAAGCTGGAAGGAGATGGTTTTACCGTTCAGAGTGAAGAATGTGACAAAGGATCAAAGGAGGGGATCAAAGATGGTCATGTTTCCCCCGAGTTTGATGACGAGCAGGATAGTATGCAAGACAGGGTGGATGAGGTGATAGATGTAGAGTTGAATACTCATGAGGAAAGAAAAGACAATGTAGCAGGAGAATCTCAGTTGGCTCAGAGGTTGGGGGATAACTGCGATTTGCTGTGTGGATCTCAAGAGGAAAACTTGGAGACCTGTACCGTTCCAGATGACTTGTTTCAAAAGGAGCATGATAGTGATTCCATGGAATCTGAAATTGAAGTTAGCATTATTGGACAAGAGTGTTCTGGTGTTAAGGGAGACAGTGGAGATTTTGAGCGTACAAGTCAAGAAGTAAGTCTAGATAATAATTTTGTGCAGCAGGGTTTGTTCATAGAGAAGGATGACAGCAGAAGCATGGAATCTGCACAAACGAATAAAAAAACAGAGAACACTTCTGAGGGCAATAATTTGAAGCCTGAAGTTGGTGGAGCTGAGGTTCCTGGAACTGAAGCTGGCTGCAGCACATCTATGGTTACTTTCAACACCAATCCGGAGGTTGCAGGTGTGGTTGAGAAGACAATATCTCTTAGACACTTTGTTATGGAGAAAGGTATAATAGCAGTCTCCATGGTGCTTCGCCACCTTTCTGGAAAAAGAAACGAATGTACTGTGGCTAAATCTGATGACATGGGTAAGGACCCTTCAGATTTATCAAGAGACAGTGATGCGAAAGATGTTCTTCAGAAGACAGTGGAGAAAACAACTTGGAACCCCTTAAATTATATTAAAACGTCATCTGATGTTGATGATGAAAATAGAGCTGTCCCAAGGGAGGAACCCATAAATGAAGGTCCACCACTACCCATAGTCATGAAAGGAAGGATTATAGTGTACACGAGACTAGGGTGTCAAGAATGTAGAGAGGTTAGGAAATTTTTGTATATGAAAAGGCTTAGATATGTTGAAATCAACATTGATGTCTATCCCAGTAGAAAGATGGAGCTGGAGAAAAATTCAGGATCTACTTCTATTCCCAAGGTTTTTTTCAATGGAATACTTATTGGAGGCTTGAGTACACTAAAGTCCTTAAATGAGTCTGGCAAACTTAATGAGAAGATTGACTACCTTATTAATGAAGTACCATCATTTGAATGCCCAGTTCCGCCACTTTCTGGAGAGGATGATTTGTCCAGTAGAGGGGCGATTGATGAAATGGCTCTAATTGTCCGCAAAATGAAAGAATGCATTGTTGTGAAGGACCGATTTTGCAAAATGCGGAGGTTTACTAACTGCTTCATTGCTTCCGAAGCTGTGGACTTCTTATCAGAAGATCAATATTTGGAAAGGAAGGAGGCTGTTGAGTTTGCACGAAAACTTGCCAGCAAACTCTTCTTTCAGCATGTTTTTGATGAGAATCTATTTGAGGATGGTAATCACCTGTATCGATTTTTGGATGACGATCCAACTGTGGCATCTTTTTGTTACAACATTCCGAGGGGGATAATTACTGTGAAGCCTAAGCCTATGACAGAAGTTGCATCGAGGCTGAGGCTTTTGTCCTATGCAATGTTTGAAGCCTATGCCTCTGAAGATGGACGTCATGTTGACTACAGAAGTATGCACGGAAGTGAGGAGTTTGCAAGATATCTAAGAACAATAGAAGAGCTCCAAAGAGGGGAAGTATGGCATTTATCTAGAGAAGAGAAGCTTGCTTTTTTTATTAATCTATATAATATGATGACCATCCATGCTATCTTAGTATGGGGCCACCCTTCTGGAGCTGTCGAAAGAAGGAAATTATTTGGAGACTTCAAATATGTTATTGGTGGATTCACCTACTCACTTTCAGCCATTCAAAGTGGCATTTTGAGGGCGAACCAACGACAACCATATACCCTTATGAAGCCATTCAGTGCAAAAGATAAACGTTTAAGGGTGGCCCTCCCTTTCCCGGAGCCAATTGTTCATTTTGCTTTGGTATGTGGTACTCGATCTGGACCCTCACTTCGGTGCTATTCTCCTGGGGACATTGACAAAGAATTAGCGGATGCAGCCCGTAATTTCTTAAGAAACGGAGGCCTTTCAATAGAGTTTACTGCAAAAGTTGCATATGCCAGTAAGATCCTTAAGTGGTTTAGTGTAGATTTTGGTAAGAATGAGGTAGAGGTCCTGAAGCATGTGTCAAGCTACTTAGATCCTGCCGAATCAGAATTATTGTTGGACCTACTTGCCACTTCTGAGTTGAAGGTGATATATCAGCCTTATGATTGGGGTTTGAACTGCTAG 2529 0.4152 MEKKELEETDEPSPRAVGKIELDSSEEDREKHSVRPETQNVDYDTSEFGNDQEDVPYNICSQDVEKLEGDGFTVQSEECDKGSKEGIKDGHVSPEFDDEQDSMQDRVDEVIDVELNTHEERKDNVAGESQLAQRLGDNCDLLCGSQEENLETCTVPDDLFQKEHDSDSMESEIEVSIIGQECSGVKGDSGDFERTSQEVSLDNNFVQQGLFIEKDDSRSMESAQTNKKTENTSEGNNLKPEVGGAEVPGTEAGCSTSMVTFNTNPEVAGVVEKTISLRHFVMEKGIIAVSMVLRHLSGKRNECTVAKSDDMGKDPSDLSRDSDAKDVLQKTVEKTTWNPLNYIKTSSDVDDENRAVPREEPINEGPPLPIVMKGRIIVYTRLGCQECREVRKFLYMKRLRYVEINIDVYPSRKMELEKNSGSTSIPKVFFNGILIGGLSTLKSLNESGKLNEKIDYLINEVPSFECPVPPLSGEDDLSSRGAIDEMALIVRKMKECIVVKDRFCKMRRFTNCFIASEAVDFLSEDQYLERKEAVEFARKLASKLFFQHVFDENLFEDGNHLYRFLDDDPTVASFCYNIPRGIITVKPKPMTEVASRLRLLSYAMFEAYASEDGRHVDYRSMHGSEEFARYLRTIEELQRGEVWHLSREEKLAFFINLYNMMTIHAILVWGHPSGAVERRKLFGDFKYVIGGFTYSLSAIQSGILRANQRQPYTLMKPFSAKDKRLRVALPFPEPIVHFALVCGTRSGPSLRCYSPGDIDKELADAARNFLRNGGLSIEFTAKVAYASKILKWFSVDFGKNEVEVLKHVSSYLDPAESELLLDLLATSELKVIYQPYDWGLNC 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01343 842 Pfam Glutaredoxin 376 433 IPR002109 -
Phco3g01343 842 ProSiteProfiles Glutaredoxin domain profile. 364 461 - -
Phco3g01343 842 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 498 564 IPR000591 GO:0035556
Phco3g01343 842 Gene3D - 481 572 IPR036388 -
Phco3g01343 842 ProSiteProfiles DEP domain profile. 493 566 IPR000591 GO:0035556
Phco3g01343 842 SUPERFAMILY Thioredoxin-like 372 455 IPR036249 -
Phco3g01343 842 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 113 842 - -
Phco3g01343 842 SMART DEP_3 492 566 IPR000591 GO:0035556
Phco3g01343 842 Gene3D Glutaredoxin 372 456 - -
Phco3g01343 842 SUPERFAMILY "Winged helix" DNA-binding domain 489 574 IPR036390 -
Phco3g01343 842 MobiDBLite consensus disorder prediction 224 238 - -
Phco3g01343 842 MobiDBLite consensus disorder prediction 1 38 - -
Phco3g01343 842 MobiDBLite consensus disorder prediction 76 103 - -
Phco3g01343 842 MobiDBLite consensus disorder prediction 306 325 - -
Phco3g01343 842 MobiDBLite consensus disorder prediction 39 57 - -
Phco3g01343 842 MobiDBLite consensus disorder prediction 1 57 - -
Phco3g01343 842 MobiDBLite consensus disorder prediction 214 247 - -
Phco3g01343 842 CDD DEP 489 563 - -
Phco3g01343 842 Pfam Protein of unknown function, DUF547 644 770 IPR006869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01343 Phco-Chr3 13190024 13205067 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01343 3 13190024 13205067 Phco3g01343 3 13190024 13205067 ECH
Phco3g01343 3 13190024 13205067 Phco7g01181 7 10231177 10234440 PCT