Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01321 ATGGCGAACTGTGTGAGCCACCACAAAATATGGCTTCTTAACTTGCTCACCTTCTTCACTGTTCTTTCCTTGTCCAATGGAAGATCAAATGCTGAGTTTCCAGTGAAAGCAGTTAATCTTGGTGGGTGGTTGGTGACTGAAGGTTGGATGAAACCTTCTCTCTTCGATGGCATTCCAAATAAAGACTTCTTGGATGGAACTGCTCTTCAGTTCAAGTCTGTGACGACAGGCAAATATCTTTGTGCTGAGTCTGGAGGAGGAACCATCATAGTTGCAAATCGCAGAGCTGCTTCCGGTTGGGAAACATTTTCATTGTGGAGGCTAGATGAGAACACTTTCAGATTCAGGGTGTTCAACAAACAGTTTGTGGGTTTAGATGGGATTAAAGTCGTTGCTGTTTCCAATATTTCCACTGATTCTTTGACATTTCATGTTGTAAAGGAAAGTGGTGATTCGAACCGTGTTCGAATCAGAGCTTCCAATGGATACTTCCTGCAGGCAAAGACAGAGGATGTGGTGACTGCTGATGCATCAAAGGTCAACAACAGCTGGGGAAATGATGACCCATCTGTTTTTGTAATGACAATTGCTGGAGTGATGCACGGGGAATTCCAAGTAACAAATGGCTATGGTCCCACAAAAGCTCCACAAGTTATGAAGGAACATTGGAGCACTTTTATTGTTGAAGATGACTTCAAGTTCATAGCCAGTAGTGGACTTAATGCTGTTAGAATTCCAATTGGCTGGTGGATAGCAAGTGATCCAACTCCACCCCCACCCTATGTCGGAGGTTCCTTGCATGTCCTAGACAATGCCTTTTCGTGGTCACTGAAATATGGACTGAAAATCATCCTTGATCTTCATGCTGCACCCGGTTCCCAAAATGGTTTTGAGCATAGTTCTTCAAGAGATGGTTCACTAGAATGGGGAAAAACAGATGAAACAATTCAAGAAACAGTTCGTGTTATAGAGTTCCTCACTGCAAGGTATGCAAAAAGCCCAAGCCTTTATGCAGTTGAGCTAATAAATGAGCCTTTCTCACCTGGTGTGACACTAGAGACTTTGAACAAGTACTATAAGGCTGGTTATGAAGCAGTGCGCAAGCACTCTTCCTCAGCTTATGTAGTGTTATCAAATAGGCTAGGATCTGCAGATCCCAGGGAACTCTTCCCTCTTGCAAATGGTTTTGAACGATCTGTGATTGATGTTCACTACTACAACCTCTTTCAAGATGTATTTAATGCCATGACTGTCCAACAGAACATTGATTTCATCTACAATAATCGCTCATCACAGCTAACTCATCTTACAACCTCAAATGGCCCTCTTACTTTTGTTGGTGAATGGGTTGCTGAATGGCAAGTCAGTGGAAGTACAAAAGAAGATTATCAAAGATTCGCCAAAGCTCAGTTAGACGTTTATGGGCGAGCCACATTTGGGTGGGCCTATTGGGCTTTAAAAAATGTTAACAACCACTGGAGTTTGGAGTGGATGATCAAGAATGGTTATATCAACCTATAA 1521 0.4254 MANCVSHHKIWLLNLLTFFTVLSLSNGRSNAEFPVKAVNLGGWLVTEGWMKPSLFDGIPNKDFLDGTALQFKSVTTGKYLCAESGGGTIIVANRRAASGWETFSLWRLDENTFRFRVFNKQFVGLDGIKVVAVSNISTDSLTFHVVKESGDSNRVRIRASNGYFLQAKTEDVVTADASKVNNSWGNDDPSVFVMTIAGVMHGEFQVTNGYGPTKAPQVMKEHWSTFIVEDDFKFIASSGLNAVRIPIGWWIASDPTPPPPYVGGSLHVLDNAFSWSLKYGLKIILDLHAAPGSQNGFEHSSSRDGSLEWGKTDETIQETVRVIEFLTARYAKSPSLYAVELINEPFSPGVTLETLNKYYKAGYEAVRKHSSSAYVVLSNRLGSADPRELFPLANGFERSVIDVHYYNLFQDVFNAMTVQQNIDFIYNNRSSQLTHLTTSNGPLTFVGEWVAEWQVSGSTKEDYQRFAKAQLDVYGRATFGWAYWALKNVNNHWSLEWMIKNGYINL 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01321 506 Gene3D Glycosidases 184 506 - -
Phco3g01321 506 FunFam Glucan 1,3-beta-glucosidase A 188 506 - -
Phco3g01321 506 Pfam Cellulase (glycosyl hydrolase family 5) 219 488 IPR001547 GO:0004553|GO:0071704
Phco3g01321 506 SUPERFAMILY Actin-crosslinking proteins 69 182 IPR008999 -
Phco3g01321 506 FunFam Glucan 1,3-beta-glucosidase A 46 185 - -
Phco3g01321 506 Gene3D - 45 183 - -
Phco3g01321 506 PANTHER FASCIN 29 506 IPR010431 GO:0007015|GO:0051015
Phco3g01321 506 SUPERFAMILY (Trans)glycosidases 33 505 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01321 Phco-Chr3 12676066 12679657 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01321 3 12676066 12679657 Phco3g01321 3 12676066 12679657 ECH