Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01319 ATGGCTACTGGAGTGTACAATCAAGCAATTGGGGCTTTTCAATCCAATTCTCACATCAACAATTTTAATCATCAGCACAAGTTCAACTGTATTGGAAGACTTGTGGTGACAAAGGATTTTTTTAGCAGTTATGGTTTGTCAAAAAGGGATCTTCGAGTAAGTAAATGTATAGAATATCAAACATCTGTGGTTGACTCGGTTTCATCCCCTTCAAGAAGCAAAACTAGTGATAGAGACACTCACAAAAAGTCAAATGAGGCTGCTTTAATCCTTGTTCGACACGGCGAGTCCTTGTGGAATGAAAAGAACTTGTTCACAGGTTGTGTTGATGTCCCCCTCAGCAAGAAGGGTATCGATGAGGCAATTGAAGCAGGCAAAAGAATTAGCAGTATTCCTGTGGATCTCATATTTACATCTGCTTTGATTCGAGCACAAATGACAGCCATGCTTGCCATGACACAGCACCGCCACATGAAGGTGCCTATCATAATGCACAATGAGAGTGAACAAGCAAGGGAGTGGAGCCAAGTTTTTTGTAAAGATACAAATACAAAAGAGCATTCCATTCCAGTCATAGCAGCCTGGCAATTGAATGAAAGAATGTATGGGGAACTACAGGGTCTCAATAAACAAGAAACAGCACAAAGATATGGCAAAGAACAAGTACATGAGTGGCGTCGAAGTTATAACATACCTCCCCCAAATGGTGAAAGTTTGGAAATGTGTGCTGAAAGGGCAGTTGCCTATTTTAGAGACCAAATTGAACCTCAACTTTTATCTGGAAAGAATGTTATGGTTTCAGCTCATGGGAATTCACTGAGATCCATTATTATGTATCTTGAGAAACTAACTTCCCAAGAGGTGATTAGTTTAGAATTGTCAACTGGAATTCCAATGCTTTATATTTGCAAAGAAGGAAGATTCATTAGGAGGGGAAGTCCAGTAGCACCAACTGAAGCTGGAGTTTATGCCTACACTAGGCGTTTGGCTCTTTACCGACAGAGGTTGGATGATATGCTTCAGTAA 1026 0.4045 MATGVYNQAIGAFQSNSHINNFNHQHKFNCIGRLVVTKDFFSSYGLSKRDLRVSKCIEYQTSVVDSVSSPSRSKTSDRDTHKKSNEAALILVRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKRISSIPVDLIFTSALIRAQMTAMLAMTQHRHMKVPIIMHNESEQAREWSQVFCKDTNTKEHSIPVIAAWQLNERMYGELQGLNKQETAQRYGKEQVHEWRRSYNIPPPNGESLEMCAERAVAYFRDQIEPQLLSGKNVMVSAHGNSLRSIIMYLEKLTSQEVISLELSTGIPMLYICKEGRFIRRGSPVAPTEAGVYAYTRRLALYRQRLDDMLQ 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01319 341 Pfam Histidine phosphatase superfamily (branch 1) 185 293 IPR013078 -
Phco3g01319 341 Pfam Histidine phosphatase superfamily (branch 1) 89 162 IPR013078 -
Phco3g01319 341 CDD HP_PGM_like 89 301 IPR013078 -
Phco3g01319 341 SUPERFAMILY Phosphoglycerate mutase-like 89 307 IPR029033 -
Phco3g01319 341 SMART PGAM_5 88 276 IPR013078 -
Phco3g01319 341 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 91 100 IPR001345 GO:0003824
Phco3g01319 341 Gene3D - 78 316 IPR029033 -
Phco3g01319 341 PANTHER PHOSPHOGLYCERATE MUTASE 77 327 IPR005952 GO:0006096|GO:0016868
Phco3g01319 341 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 86 315 IPR005952 GO:0006096|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01319 Phco-Chr3 12656134 12658489 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01319 3 12656134 12658489 Phco3g01319 3 12656134 12658489 ECH
Phco3g01319 3 12656134 12658489 Phco7g01156 7 9949846 9952655 PCT