Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01318 ATGTTAACATCACCAGAACAGAAGGCATTGATCAATGAGGTGAGAAGGTTAATTGGGCCACAGTCTGGTAAGGCATCTATTTTTTGTTCTGATGCCTCCATCTCAAGGTATTTGAGGGCACGGAATTGGAATGTGAAGAAGGCAGCTAAAATGTTGAAACTGACCCTGAAATGGAGACAAGAATACAAACCGGAAGAAATCCGTTGGGAAGATGTTGCTCATGAAGCAGAGACAGGAAAAATATATAGATCAAATTATATTGACAAGCATGGGAGAACTGTCCTAGTAATGAGACCTAGTCGACAGAACTCAAAGTCAACTAAAGGACAAATTAAATATTTGGTATACTGCATGGAGAATGCTGTTTTTAATCTTCCACCAGAACAAGAACAAATGGTCTGGTTGATTGACTTCCAGGGTTTCAATATGTCACATATATCAATAAAGGTGACACGTGAAACTGCCCATGTATTACAAGAACATTATCCTGAACGCCTGGGTCTGGCAATACTTTACAATGCACCCAAGTTCTTTGAACCATTTTTCACGATGGTAAAGCCGATACTAGAGCCTAAGACTTATAATAAAGTCAAGTTCGCATACTCTGATGATCAGAACACCAAGAAGATTATGGAGGATTTGTTTGACTTTGACCAACTTGAATCTGCATTTGGTGGGAATGATGATACAGGATTTGACATAAATAAATATGCTGATAGAATGAAAGAGGATGACAAGAAGATTCCTGCTTTCTGGACTAGGGAAAACTCTCCATCATCAGTTCCTAATCATGTTCCTTCTTTAGATTCTACTAGGTTAGACTCAAATACTGATGGTTCGGACAATGAGAAACTAGACTCTTCCCCTGACCTCGTGGTGGACACAGGTATCATTAACCCGGACCATAAAAGCTTGGTTAATGAAGGAGAAAGAAATACCAGTGCAGATTAG 951 0.3933 MLTSPEQKALINEVRRLIGPQSGKASIFCSDASISRYLRARNWNVKKAAKMLKLTLKWRQEYKPEEIRWEDVAHEAETGKIYRSNYIDKHGRTVLVMRPSRQNSKSTKGQIKYLVYCMENAVFNLPPEQEQMVWLIDFQGFNMSHISIKVTRETAHVLQEHYPERLGLAILYNAPKFFEPFFTMVKPILEPKTYNKVKFAYSDDQNTKKIMEDLFDFDQLESAFGGNDDTGFDINKYADRMKEDDKKIPAFWTRENSPSSVPNHVPSLDSTRLDSNTDGSDNEKLDSSPDLVVDTGIINPDHKSLVNEGERNTSAD 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01318 316 Gene3D - 2 256 IPR036865 -
Phco3g01318 316 SMART sec14_4 75 229 IPR001251 -
Phco3g01318 316 MobiDBLite consensus disorder prediction 253 316 - -
Phco3g01318 316 SUPERFAMILY CRAL/TRIO domain 69 247 IPR036865 -
Phco3g01318 316 CDD SEC14 77 227 IPR001251 -
Phco3g01318 316 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 69 232 IPR001251 -
Phco3g01318 316 PANTHER GH16843P 5 257 - -
Phco3g01318 316 Pfam CRAL/TRIO domain 78 226 IPR001251 -
Phco3g01318 316 SUPERFAMILY CRAL/TRIO N-terminal domain 3 71 IPR036273 -
Phco3g01318 316 MobiDBLite consensus disorder prediction 253 275 - -
Phco3g01318 316 SMART CRAL_TRIO_N_2 30 55 IPR011074 -
Phco3g01318 316 FunFam Phosphatidylinositol transfer protein 3 1 261 - -
Phco3g01318 316 Pfam CRAL/TRIO, N-terminal domain 30 53 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01318 Phco-Chr3 12645616 12648006 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01318 3 12645616 12648006 Phco3g01318 3 12645616 12648006 ECH
Phco3g01318 3 12645616 12648006 Phco7g01154 7 9932852 9934633 PCT