Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01310 ATGGAAGGCATAATGAGCAAGCTCCGCAACCTCGATGCTTACCCTAAAATCAACGAAGATTTCTACAGCCGCACGCTCTCCGGCGGCGTTATCACCCTCGCTTCCTCTATCATCATGCTCTTGCTCTTCTTCTCCGAGCTCCGGTTGTACCTCCACTCGGTCACCGAGACCAAGCTTGTTGTAGACACTTCCAGAGGCGAAACGCTGCGTATCAACTTTGATGTCACGTTTCCTGCGCTTCCGTGTTCCATACTTAGTCTCGATGCCATGGATATCAGCGGAGAGCAGCATCTAGACGTTAAACATGATATAATCAAAAAGAGATTAGATTCTCACGGCAATGTGATTGAAACGAGGCAAGAAGGAATTGGCGCTCCCAAGATTGAAAAGCCCTTGCAAAGACATGGAGGCAGGCTTGAGCACAACGAGACTTATTGTGGTTCCTGTTTTGGTGCTGAAGCGTCAGATGATGATTGTTGTAATTCCTGCGAGGATGTTCGTGAAGCATACCGTAAGAAAGGATGGGCACTTTCAAACCCAGATTTAATTGATCAGTGCAAAAGAGAAGGATTCTTACAAAGAATCAAAGATGAAGATGGCGAAGGATGCAATGTGTATGGTTTCTTGGAAGTCAATAAGGTTGCGGGGAACTTTCATTTTGCCCCTGGGAAAAGCTTTCAGCAATCTGGTGTACATGTGCATGACCTGCTGGCCTTTCAAAAGGATTCTTTTAATTTAAGTCACCACATCAACAGATTATCTTATGGAGATTATTTTCCTGGTGTTGTCAATCCCCTTGACAATGTGCACTGGATACAAGAAACACCAAGTGGGATGTACCAATATTTTATTAAGGTTGTGCCGACTGTTTACACTGACGTGAATGGGCATGCTATCCAGTCAAATCAGTTCTCTGTGACGGAACACTTCAGGACTGGAGATGTGGGCCGTCTGCAGTCCCTCCCTGGAGTTTTCTTCTTCTATGACCTTTCTCCAATTAAGGTTACTTTTACCGAAGAACATGTCTCATTCTTACATTTTCTTACTAACGTGTGTGCTATAGTTGGAGGTATTTTTACGGTTTCTGGAATACTAGATTCATTTATTTATCACGGTCAAAGGGCTATCAAGAAGAAGATGGAACTTGGTAAATTTAACTGA 1161 0.4376 MEGIMSKLRNLDAYPKINEDFYSRTLSGGVITLASSIIMLLLFFSELRLYLHSVTETKLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDIIKKRLDSHGNVIETRQEGIGAPKIEKPLQRHGGRLEHNETYCGSCFGAEASDDDCCNSCEDVREAYRKKGWALSNPDLIDQCKREGFLQRIKDEDGEGCNVYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQKDSFNLSHHINRLSYGDYFPGVVNPLDNVHWIQETPSGMYQYFIKVVPTVYTDVNGHAIQSNQFSVTEHFRTGDVGRLQSLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGIFTVSGILDSFIYHGQRAIKKKMELGKFN 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01310 386 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 5 385 IPR045888 -
Phco3g01310 386 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 8 97 IPR039542 -
Phco3g01310 386 Pfam Endoplasmic reticulum vesicle transporter 149 366 IPR012936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01310 Phco-Chr3 12516793 12523453 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01310 3 12516793 12523453 Phco3g01310 3 12516793 12523453 ECH