Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01304 ATGAAGGGAGAGACGGCGACGCTGGTGCTGGTGAACCTGGCGGGGATAATGGAAAGGGCGGATGAGTCACTGCTTCCTGGAGTCTACAAGGAAGTGGGAGCGGCGCTGCACACCGACCCCACCGGCCTCGGTTCCCTCACTCTCTTCCGATCCATCGTTCAGTCCTCCTGCTACCCTATCGCCGCCTATCTCGCCGTCCGCCACAACCGCGCCCATGTTATCGCCCTCGGTGCTTTTCTCTGGGCCGCCGCCACCTTCCTCGTTGCATTCTCCTCCACTTTCTTCCAGGTAGCTTTGTCACGAGCATTTAATGGGATTGGCCTTGCGCTTGTAGCACCTGCAATCCAGTCTCTTGTTGCTGACTCAACTGATGATAGCAATCGTGGCATGGCTTTTGGATGGCTTCAACTAACAGCCAATGTTGGTTCAATTATTGGTGGCCTCTTCTCAGTGTTGATAGCTCCAATAACGGTGTTTGGAATTCCTGGTTGGAGAATTTCCTTTCACATTGTTGGACTAATAAGCATTATAGTAGGTGTTTTAGTATACCTCTTTGCCAATGATCCACACTTCTCAGATAATGGTACACATGATAGGAGGCAAGCTCCAAATAAAACATTTTGGTCTGAAGTGAAAGATCTGGTTCAGGAGTCCAAGTCAGTTTTGAAGATTTCGTCTTTTCAGATTATTGCTGCACAGGGTGTCACTGGCTCCTTTCCCTGGTCTGCTTTATCATTCGCACCAATGTGGTTAGAGCTTACTGGCTTCACCCATAACAAAACTGCTTTCCTCATAGCTCTGTTTGTCGTTGCCAGTTCTATTGGGGGATTGTTTGGAGGTAAGATGGGAGATATTCTCTCCAAGCATCTTCCAAATTCTGGGAGAATAATTCTGGCACAGATAAGCTCTGGATCAGCCATCCCCTTAGCAGCACTTCTTTTGCTTGGTTTGCCAGATGATTCCTCCTCTATAGTATCTCATGCTTTGGTTCTAATAATTATGGGACTCCTGATATCTTGGAACGCTCCTGCTACAAACAATCCAATTTTTGCAGAGATAGTTCCAGAGAGATCCCGAACAAGTGTATATGCCTTGGACAGATCTTTTGAGTCTATATTATCATCTTTTGCTCCCCCTGCAGTGGGGATTTTGGCTCAGCATGTTTATGGGTATAAGCCCATTCCTGAAGGGTCTAGTGAATCTCAAGAGATTTTAACAGACAGAGAGAATGCTGCATCATTGGCTAAGTCTCTTTACACAGCAATAGGAATCCCAATGGCTATCTGCTGTATAATCTACACATTTCTTTATAGAACATATCCAAGAGACAGGGAACGAGCTAAGATGGGGGCTTTAATAGAATCAGAGATGCGGTTAATTGAATCAGGTGGTTTGGCCATGGATAAAGAGTTTGAGTCACAAGAAGTATCTATTGCAGATTATGATGGTGATGGCGATCTTGATGGTGAAGAGAACACATTACTCTACCGGCAGTTGACATTTTCCAAAGAATAG 1515 0.4581 MKGETATLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQSSCYPIAAYLAVRHNRAHVIALGAFLWAAATFLVAFSSTFFQVALSRAFNGIGLALVAPAIQSLVADSTDDSNRGMAFGWLQLTANVGSIIGGLFSVLIAPITVFGIPGWRISFHIVGLISIIVGVLVYLFANDPHFSDNGTHDRRQAPNKTFWSEVKDLVQESKSVLKISSFQIIAAQGVTGSFPWSALSFAPMWLELTGFTHNKTAFLIALFVVASSIGGLFGGKMGDILSKHLPNSGRIILAQISSGSAIPLAALLLLGLPDDSSSIVSHALVLIIMGLLISWNAPATNNPIFAEIVPERSRTSVYALDRSFESILSSFAPPAVGILAQHVYGYKPIPEGSSESQEILTDRENAASLAKSLYTAIGIPMAICCIIYTFLYRTYPRDRERAKMGALIESEMRLIESGGLAMDKEFESQEVSIADYDGDGDLDGEENTLLYRQLTFSKE 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01304 504 SUPERFAMILY MFS general substrate transporter 7 445 IPR036259 -
Phco3g01304 504 Pfam Major Facilitator Superfamily 13 378 IPR011701 GO:0022857|GO:0055085
Phco3g01304 504 Gene3D MFS general substrate transporter like domains 5 192 IPR036259 -
Phco3g01304 504 Gene3D MFS general substrate transporter like domains 226 449 IPR036259 -
Phco3g01304 504 PANTHER SPINSTER 6 458 IPR044770 -
Phco3g01304 504 CDD MFS_spinster_like 8 433 IPR044770 -
Phco3g01304 504 FunFam Major facilitator superfamily protein 1 396 - -
Phco3g01304 504 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 444 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01304 Phco-Chr3 12402105 12405110 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01304 3 12402105 12405110 Phco3g01304 3 12402105 12405110 ECH