Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01289 ATGTCTAGGCCTCTACAAAGAGGTGTGTCTGGTGGGGTTAGAGTCTCTGGGAGTGGCCATGACTTGTGGGACTCCCAATCTAAGGATAAAACAGAAAAGGAAGATTTGGATAAGAGGGGTTCTTCAGATCATAGCCCTTTAGCTTTGAGGTTTCCTTTGGGGTTGCTTTTGGGAAATAATTCTGATTCCAAATATGGCAATGGCATTGGTGAGAATGGTTTTGCATCCGATTCCTTCATTGTTAGCTCCCCGCGGAGCCGGCTTAAGCTGATGCTGCTTTCTTTGAAGTTTAGTTTAGTGGTCATAGTTGTTCTGGCTCTCACTGGATCTTTTTGGTGGACTTTATCGATTTCATCCTCGTCAAGAGGTCACATTTACCATGGTTATAGAAGGCTTCAAGAGAAGCTTGTCTCAGACCTTTTGGAAATTGGTGAGTTTTCTCGCGGACCGCTGAGGTTGAAGGAATCGGAATTCTGTTCTCAGGATTTGGAAAACTTTGTTCCTTGCTACAATGTTTCTGGGAATGTGGAATTGGAAGTTTCTGATGGCAACGAAGTTGACAGGCAGTGCGGTCACGAGCTTAGGCAGAATTGTTTAGTTCTGCCACCAGTGAATTACAAAATTCCTTTAAGGTGGCCTACTGGAAAAGATGTTATCTGGGTTGCTAATGTGAAGATCACGGCACAGGAGGTTCTTTCTTCTGGAAGTTTGACAAAGAGGATGATGATGCTGGATGAAGAGCAAATCTCATTTCGTTCAGCCTCTCACATGTTTGACGGTGTCGAAGACTACTCACATCAAATTGCTGAAATGATTGGACTTAGAAATGAATCTTATTTCATTCAAGCTGGGGTTCGAACTATACTAGACATAGGTTGTGGCTATGGTAGCTTTGGAGCACATCTCTTTGACAGTCAGCTTTTAACTACGTGCATTGCAAACTATGAGCCTTCTGGCAGTCAAGTTCAGCTCACTCTTGAGAGGGGTCTTCCTGCTATGATTGCTTCTTTCACTTCAAAGCAGTTGCCATTTCCATCTCTATCCTTTGATATGTTACATTGTGCCAGATGTGGCATTGAATGGGACCAGAAAGATGGCATTCTCCTGATTGAAGCTGATAGACTTTTAAAACCGGGTGGATACTTTGTTTGGACATCACCACTCACAAATGCTCGTAACAAAGAGAATCAGAAAAGATGGAAGTTTATACAGGATTTTACATTAACTCTGTGCTGGGAACTGCTATCACAACAAGATGAAACTGTAGTATGGAAGAAAACTAGTAAAAAAAGTTGCTATGCTTCAAGAAAGTCAGGTTCTGGCCCTTCTTTGTGTGGTAGAGGTATTGACGTGGAGTCTCCTTATTATCGAGAACTGCAAAACTGCATAGGAGGAATGCAGAGCGCTCGTTGGGTTCCAATTGAAAAAAGGGAAAGATGGCCTTCTCGAGCTAACTTGAACAAGAAAGAGTTAGCTATATACGGGTTGCAGCCTGATGAACTTACTGAGGACTCTGACAATTGGAAAACAGCAGTCCAGAATTATTGGTCACTCCTGTCACCTTTGATATTTTCTGATCATCCTAAGAGGCCTGGCGATGAGGACCCCTCACCCCCTTACAACATGCTCAGAAATGTTCTAGATATGAATGCTCATTTTGGTGGCTTTAATTCTGCATTGTTGCAAGCTAGAAAGTCTGTGTGGGTGATGAATGTTGTCCCAATTAGTGGACCCAATTATCTTCCCTTGATCCAGGACAGAGGATTTGTTGGTGTTCTCCATGATTGGTGCGAGGCTTTTCCGACATACCCTAGAACCTATGACTTGGTGCATGCAGCTGGATTTCTATCCCTTGAAACTGAGCAACACAGATGTACCATGCTTGACATGTTCCTTGAAATTGACAGGATACTTCGCCCAGAGGGTTGGGTTATAATTCGCGACACAGTTCCCTTGATAGAATCAGCTAGAGCCTTAACAGCACAGCTGAAGTGGGATGCAAGAGTGATAGAAGTTGAAAGTGACAGTGATCAGAGACTCCTCATCTGCCAGAAACCTTTCTTTAAGAGACAGGCAAGCTAA 2082 0.4328 MSRPLQRGVSGGVRVSGSGHDLWDSQSKDKTEKEDLDKRGSSDHSPLALRFPLGLLLGNNSDSKYGNGIGENGFASDSFIVSSPRSRLKLMLLSLKFSLVVIVVLALTGSFWWTLSISSSSRGHIYHGYRRLQEKLVSDLLEIGEFSRGPLRLKESEFCSQDLENFVPCYNVSGNVELEVSDGNEVDRQCGHELRQNCLVLPPVNYKIPLRWPTGKDVIWVANVKITAQEVLSSGSLTKRMMMLDEEQISFRSASHMFDGVEDYSHQIAEMIGLRNESYFIQAGVRTILDIGCGYGSFGAHLFDSQLLTTCIANYEPSGSQVQLTLERGLPAMIASFTSKQLPFPSLSFDMLHCARCGIEWDQKDGILLIEADRLLKPGGYFVWTSPLTNARNKENQKRWKFIQDFTLTLCWELLSQQDETVVWKKTSKKSCYASRKSGSGPSLCGRGIDVESPYYRELQNCIGGMQSARWVPIEKRERWPSRANLNKKELAIYGLQPDELTEDSDNWKTAVQNYWSLLSPLIFSDHPKRPGDEDPSPPYNMLRNVLDMNAHFGGFNSALLQARKSVWVMNVVPISGPNYLPLIQDRGFVGVLHDWCEAFPTYPRTYDLVHAAGFLSLETEQHRCTMLDMFLEIDRILRPEGWVIIRDTVPLIESARALTAQLKWDARVIEVESDSDQRLLICQKPFFKRQAS 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01289 693 FunFam probable pectin methyltransferase QUA2 247 427 - -
Phco3g01289 693 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 498 652 IPR029063 -
Phco3g01289 693 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 44 688 IPR004159 GO:0008168
Phco3g01289 693 MobiDBLite consensus disorder prediction 23 44 - -
Phco3g01289 693 Gene3D Vaccinia Virus protein VP39 253 438 IPR029063 -
Phco3g01289 693 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 281 426 IPR029063 -
Phco3g01289 693 MobiDBLite consensus disorder prediction 1 44 - -
Phco3g01289 693 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 165 685 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01289 Phco-Chr3 12131845 12136158 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01289 3 12131845 12136158 Phco3g01289 3 12131845 12136158 ECH