Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01264 ATGCAGAGGCGCAAGTGGATTCCGTTGGCTCTGCTGAGAAAGTTGCTAATTTCAGCCATATGCTTCATAGCTTTTGTGGCTCTCTTCTCTGTGCGCATACACATTGTTCCTTCCTCTAAGGATCACAGGTTCAACGACAAGATCTCCACGGCTCAGGATCTGCAGAGCTGGACGCGAGAGCTCGCACCACCCCATTTGTCTAAAGCTCCACTTTCTACTCCCAAGTTGAATGGTACAAGAGGGTACTTAGATTACCAGAAGTTGTGGAAGCCTCCATCAAATCGTGGGTTTTTGCCTTGTACAGAGCCCACACCTAACTACACCACTCCTGCAGAGTCGCGAGGATATCTTTTAGTACATACAAATGGTGGGCTCAACCAAATGCGTTCTGGGATATGTGATATGGTAGCAGTGGCTCGTATCATAAAGGCCACTCTAGTAATTCCAGAACTTGATAAAAGATCATTTTGGCAAGATACTAGCAATTTCTCTGATGTTTTTGATGAAGAGCATTTTATGAATTCTCTAGCTAATGATGTAAAAATCATTAAGAAACTCCCCTACGATCTGGTTAATGAAACCAAAGTGGTCAAGCAATTCATAAGCTGGTCTGGCATGGATTACTACGAGAATGAGATTGCTAGCTTGTGGGAAGATTACCAAGTTATTCGAGCTTCCAAATCTGATTCACGATTAGCAAACAACAATCTGCCTCCAGACATACAGAAGCTTCGTTGCCGGGCTTGTTATGAAGCACTTCGCTTCTCTCCTCGCATTGAAAAACTGGGAAAATTGTTGGTAGAGAGGATGAGGTCATTTGGTCCTTACATTGCGCTGCACTTGCGTTTCGAGAAGGATATGCTTGCATTTAGTGGCTGCACCCATGATTTATCTCTTGTTGAAGCTGAAGAGCTTCGGATGATCAGAGAGAACATTTCCTATTGGAAAATAAAGGAGATTGATCCAATAGAACAGAGGTCCAAAGGGCTTTGCCCCTTAACTCCAAAGGAAGTTGGGATTTTTCTTACTGCTCTTGGATACCCATCAACGACTCCGATATATATTGCTGCTGGAGAGATATATGGGGGCGAGTCCCACATGGCTGAATTGCGTTCCCGATATCCATTGTTGATGAGCAAGGAAAAGTTGGCATCCATAGAAGAGCTTGAACCTTTTTCCAATCATGCATCCCAAATGGCTGCTCTTGACTATATTGTATCTATTGAAAGTGATGTATTCATACCTTCTTATTCCGGAAACATGGCAAAGGCTGTTGAGGGTCATCGTCGATTTCTTGGACGTGGAAGAACAATATCTCCAGATAAGAAAGTCCTCGTTCGCCTGTTTGATAAACTGGATCAGGGACTAATGACGGAGGGGAAGAAATTATCAAATAGGATTATTGATCTCCACCGAAGACGACTTGGTTCTCCCAGAAAGAGAAAAGGGCCAATTTCTGGGACAAAGGGGATGGAAAGGTTCCGGTCAGAAGAAACCTTTTATGCTAATCCCTTACCTGATTGTTTATGCCGGAGAGAACCAGCACCACCTCTAAACATCTCTCACATTGTTTGA 1575 0.4362 MQRRKWIPLALLRKLLISAICFIAFVALFSVRIHIVPSSKDHRFNDKISTAQDLQSWTRELAPPHLSKAPLSTPKLNGTRGYLDYQKLWKPPSNRGFLPCTEPTPNYTTPAESRGYLLVHTNGGLNQMRSGICDMVAVARIIKATLVIPELDKRSFWQDTSNFSDVFDEEHFMNSLANDVKIIKKLPYDLVNETKVVKQFISWSGMDYYENEIASLWEDYQVIRASKSDSRLANNNLPPDIQKLRCRACYEALRFSPRIEKLGKLLVERMRSFGPYIALHLRFEKDMLAFSGCTHDLSLVEAEELRMIRENISYWKIKEIDPIEQRSKGLCPLTPKEVGIFLTALGYPSTTPIYIAAGEIYGGESHMAELRSRYPLLMSKEKLASIEELEPFSNHASQMAALDYIVSIESDVFIPSYSGNMAKAVEGHRRFLGRGRTISPDKKVLVRLFDKLDQGLMTEGKKLSNRIIDLHRRRLGSPRKRKGPISGTKGMERFRSEETFYANPLPDCLCRREPAPPLNISHIV 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01264 524 Pfam GDP-fucose protein O-fucosyltransferase 116 431 IPR019378 -
Phco3g01264 524 FunFam O-fucosyltransferase 28 247 441 - -
Phco3g01264 524 PIRSF UCP009360 1 514 IPR024709 -
Phco3g01264 524 PANTHER OS02G0726500 PROTEIN-RELATED 14 511 - -
Phco3g01264 524 CDD O-FucT_plant 116 437 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01264 Phco-Chr3 11652183 11656842 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01264 3 11652183 11656842 Phco3g01264 3 11652183 11656842 ECH
Phco3g01264 3 11652183 11656842 Phco7g01098 7 9287532 9292147 PCT