Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01249 ATGAGAAGGTTCACGCGTTTAACGCCGTATCGGCGCCATTTGCTTTCGTCTCTGAGCTCAGAATTGCTCGTGGATAAAGGAGAATCATCATTCAGCAAATTATTGTCGACTGGCCAATCGTTTTTGCTGGCTCGGGCTTTGGTCAGTTGCGGTTTCGTCACGAAAACAGAGGAGTCTCTGATTCCGAGAGTACCGTTTAGATATCGTTATTTCCATGCCACAGCATTGTCTTCTTCGGCTGAGCGAGACTACTACCGAGTTCTTGGTGTTCCTGAAAATGCCAGTCAGGACGAGATAAAGAAGGCATTTCACTTGCTTGCTAAAAGGTACCATCCAGATGCAAACAAGAACAATCCATCTGCTAAGAGGAAATTTCAAGATATAAGAGAAGCTTATGAGACATTGAGAGACTCTAAAAAGAGAGCACAGTATGACGAGATGCATACTCGTGGTTCAGAAGATACAGAATATGATCATGGTGATGCAGAAAGGTTTAGAAATGCTTATCGTTCTCATTTTTCAGATTCATTTCATAAAGTATTCTCTGAGATATTTGAAGAATCAACTACTCAATTCTCATCAAATATAGAGGTGGACTTGTCTCTTACTTTCTCAGAAGCAGCAAGAGGATGCACCAAACACTTGTCATTTGATGCATTAGTTCCATGTGATTATTGCAATGGGAAGGGCCATCCTCTTGATGCCATTCCAAAAGTTTGTCCAACATGCAGGGGCTTAGGTCGAGTTACGATCCCCCCATTTACATCAACATGTATAACTTGTAAAGGATCAGGCCGAATCATTAAGGACTTTTGTATAACATGTAGAGGATCTGGGGTGGTTGAAGGGGTTAAAGAGGTTAAAGTTACTATACCAGCAGGTGTGGATTCGGGTGATACAATCCATGTGCCAGAGGGTGGGAATGCTGCTGGAAGTGGAGGCCGACATGGAAGTTTATACATTAAAATAAAGGTGGTTGAGGATTCAATCTTTATCAGAGATGGTGCAAATATCTATGTGGAGTCTAATATTAGCTTTACACAGGCTATTCTTGGGGGCGAAGTTGAGGTGCCTACTTTATCTGGGAAGATGCAATTAAAAATACCCAAGGGTGTTCAACATGGACAGCTTCTGGTATTAAGAGGCAAAGGACTTCCAAAGCATGGGTTTCTTGTACATCATGGGGATCAATATGTACGGTTTCGTGTTAACCTTCCCATTGTAATCAATGAACGACAACGTGCTATACTTGAAGAACTTGCGAAGGAAGAAATAAATGAGGGAAACAGCTCTTCATTTGAGGGAAATTGGTGGCAGCAAATTCTTGAACACACGACGGCTTCAAAGTTTATGCTGGAACTATCTGTGCTGATATTATTCCTTGTCGTCATTAACAAAGTGTTGACCTGA 1410 0.4177 MRRFTRLTPYRRHLLSSLSSELLVDKGESSFSKLLSTGQSFLLARALVSCGFVTKTEESLIPRVPFRYRYFHATALSSSAERDYYRVLGVPENASQDEIKKAFHLLAKRYHPDANKNNPSAKRKFQDIREAYETLRDSKKRAQYDEMHTRGSEDTEYDHGDAERFRNAYRSHFSDSFHKVFSEIFEESTTQFSSNIEVDLSLTFSEAARGCTKHLSFDALVPCDYCNGKGHPLDAIPKVCPTCRGLGRVTIPPFTSTCITCKGSGRIIKDFCITCRGSGVVEGVKEVKVTIPAGVDSGDTIHVPEGGNAAGSGGRHGSLYIKIKVVEDSIFIRDGANIYVESNISFTQAILGGEVEVPTLSGKMQLKIPKGVQHGQLLVLRGKGLPKHGFLVHHGDQYVRFRVNLPIVINERQRAILEELAKEEINEGNSSSFEGNWWQQILEHTTASKFMLELSVLILFLVVINKVLT 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01249 469 SUPERFAMILY HSP40/DnaJ peptide-binding domain 331 417 IPR008971 GO:0006457|GO:0051082
Phco3g01249 469 CDD DnaJ_C 194 406 - -
Phco3g01249 469 SUPERFAMILY Chaperone J-domain 79 177 IPR036869 -
Phco3g01249 469 SMART dnaj_3 82 140 IPR001623 -
Phco3g01249 469 Pfam DnaJ C terminal domain 196 406 IPR002939 -
Phco3g01249 469 ProSiteProfiles Zinc finger CR-type profile. 210 284 IPR001305 GO:0031072|GO:0051082
Phco3g01249 469 Gene3D - 326 433 - -
Phco3g01249 469 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 210 281 IPR036410 -
Phco3g01249 469 Gene3D DnaJ domain 79 193 IPR036869 -
Phco3g01249 469 Pfam DnaJ domain 83 145 IPR001623 -
Phco3g01249 469 ProSitePatterns Nt-dnaJ domain signature. 125 144 IPR018253 -
Phco3g01249 469 Hamap Chaperone protein DnaJ [dnaJ]. 80 450 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Phco3g01249 469 SUPERFAMILY HSP40/DnaJ peptide-binding domain 195 326 IPR008971 GO:0006457|GO:0051082
Phco3g01249 469 Gene3D - 219 252 - -
Phco3g01249 469 Gene3D - 253 287 - -
Phco3g01249 469 PRINTS DnaJ domain signature 103 118 IPR001623 -
Phco3g01249 469 PRINTS DnaJ domain signature 85 103 IPR001623 -
Phco3g01249 469 PRINTS DnaJ domain signature 120 140 IPR001623 -
Phco3g01249 469 PRINTS DnaJ domain signature 140 159 IPR001623 -
Phco3g01249 469 ProSiteProfiles dnaJ domain profile. 83 148 IPR001623 -
Phco3g01249 469 CDD DnaJ 83 137 IPR001623 -
Phco3g01249 469 Gene3D - 194 324 - -
Phco3g01249 469 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 49 427 - -
Phco3g01249 469 FunFam Chaperone protein dnaJ 1, mitochondrial 326 432 - -
Phco3g01249 469 Pfam DnaJ central domain 223 279 IPR001305 GO:0031072|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01249 Phco-Chr3 11360259 11376832 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01249 3 11360259 11376832 Phco3g01249 3 11360259 11376832 ECH