Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01232 ATGGCACCCAGTTTTGATTGCTTTTCGAGTCTTCTCTGTGCGGAAGATAATATTATTTTTGACGAAAATGATCGCGGAGGTTTGGTGGAGGAGTTGGAGGACGCGTGGGAGCATCCTATATATGATCGAAATCTTAGTCAAATTGAGAACTTGGATGTCCAATATGTGTCGTTTCCATTGCCGAGTGACGAGTGTTTGAGACTAATGATGGAAACAGAATTGCATCACTTGCCTAATGGTGATTATGTGAATAGGCTGAGGAGTGGGGATTTGGACATTGGGGCCAGAAAAGAGGCCGTTGATTGGATTGAAAAGGTCCGTGAGCACTTTGGTTTTGGACCTCTCTGTGCATATCTATCTATAAATTACTTGGACCGCTTCCTCTCTGTTTATGAATTACCAAAGCAACGAGCTTGGACAATGAAATTGTTGGCTGTAGGTTGCGTATCTTTGGCAGCCAAAATGGAAGAGACTGATGTTCCTACATCTCTTGATTTGCAGGTGGGTGAATCTAAGTATATATTTGAAGCCAAAACAATACAGAGAATGGAGCTTCTTGTTCTGAACACATTGAAGTGGAGAATGCAAGCAATTACCCCATTTTCCTTCATTGACTATTTCCTTCAGAAGATCAATGATGATCAAGCACCAATTGGAGCTTCAATTTTGCAATCCTCCGAGCTTATACTGAGTACTGTAAGAGGAATTGACTTCATTGAGTTCAGACCCTCAGAGATTGCAGCAGCAGTGGCAATATCTGTGGTGGGGGAGGGCCAAACAGTTCATACAGAGAAAGCAAGTTCTGATCTGATTCAGCCTGTAGGAAAGGAGAGTGTCTTGAAGTGTGTTAAAATGATCCAAGAGCTGTCATCACACAGTGGTTCTGCTAAGGATGCCATTCCTTCTGTTTCTGTTCCTAGTGTGCCTGAAAGCCCAATAAGGGTGTTGAGCAATGCATGCTTCAGCTACAAAAGTGAAGACCCAAATGCTGCTCCTTGTGCAAATTCTTCACATAATGATAGTCCAGATGCTAAAAGGAGGAAGCTAGACAAAACCTTTGGAGAATAG 1068 0.426 MAPSFDCFSSLLCAEDNIIFDENDRGGLVEELEDAWEHPIYDRNLSQIENLDVQYVSFPLPSDECLRLMMETELHHLPNGDYVNRLRSGDLDIGARKEAVDWIEKVREHFGFGPLCAYLSINYLDRFLSVYELPKQRAWTMKLLAVGCVSLAAKMEETDVPTSLDLQVGESKYIFEAKTIQRMELLVLNTLKWRMQAITPFSFIDYFLQKINDDQAPIGASILQSSELILSTVRGIDFIEFRPSEIAAAVAISVVGEGQTVHTEKASSDLIQPVGKESVLKCVKMIQELSSHSGSAKDAIPSVSVPSVPESPIRVLSNACFSYKSEDPNAAPCANSSHNDSPDAKRRKLDKTFGE 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01232 355 Gene3D - 67 284 - -
Phco3g01232 355 SMART cyclin_7 101 189 IPR013763 -
Phco3g01232 355 SMART Cyclin_C_2 198 313 IPR004367 -
Phco3g01232 355 MobiDBLite consensus disorder prediction 327 355 - -
Phco3g01232 355 FunFam D6-type cyclin 192 284 - -
Phco3g01232 355 Coils Coil 353 355 - -
Phco3g01232 355 Pfam Cyclin, C-terminal domain 198 299 IPR004367 -
Phco3g01232 355 SUPERFAMILY Cyclin-like 180 288 IPR036915 -
Phco3g01232 355 SUPERFAMILY Cyclin-like 58 195 IPR036915 -
Phco3g01232 355 ProSitePatterns Cyclins signature. 96 127 IPR006671 -
Phco3g01232 355 Pfam Cyclin, N-terminal domain 66 195 IPR006671 -
Phco3g01232 355 CDD CYCLIN_AtCycD-like_rpt1 95 193 - -
Phco3g01232 355 Gene3D - 79 196 - -
Phco3g01232 355 FunFam D2/4-type cyclin 79 191 - -
Phco3g01232 355 PANTHER CYCLINS 68 291 IPR039361 -
Phco3g01232 355 CDD CYCLIN_AtCycD-like_rpt2 198 286 - -
Phco3g01232 355 MobiDBLite consensus disorder prediction 340 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01232 Phco-Chr3 11090231 11092246 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01232 3 11090231 11092246 Phco3g01232 3 11090231 11092246 ECH