Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01213 ATGTTGCAAAGGGCAGCAAGCAATGCATATTCATGGTGGTGGGCCAGCCACATCAGGACAAAGCAGTCAAAATGGCTGGATCAAAGCCTCCATGATATGGAGGAGAAGGTGGCTGAAACCCTCGCTGTGCTGCGAGATGAGGGAGACTCATTTGCTAAGAGGGCAGAAATGTATTACAAGAAGAGGCCAGAGTTGGTAAATTTTGTGGAAGAAACCTTTCGAGCATATAAAGCCTTAGCAGACAGATATGATCATTTATCAAAGGAACTTCAAAGTGCCAACCGCACTATAGCCAGTGTCTTCCCAGACCAAGTCCCATGTCATATTGAAGAAGATGAAGAAGAAGAAAGTGACACAGGAACTAATACATTATCATCAGACCCCAACAACAATCAAACACATGATAAACCATCCATTCCTAAAGTTCCAAAAACCCCAAAGAAGGATTTTAGAAGTCCTTCCATGTTGATCTCCAGAAAGGGCACACTCAAGAAGACTGCTAGCTCTGCAAAATATATTCCAACAATTTCATGTTCAGGTCTGACCAAGGTTGAAGCCTTGGCAGAAATTGACAAGCTTCAGAAAGAAATATTGTCACAGCAAACTGAGAAAGAGTTTGTGAGGAGTTTGTATGAACGCGCCTATGGAAAGTACTGGGAAATTGAAGACCAGATCGCAGCAACACAGAAAAGAGTTTGCAGCTTGCAAGATGAGTTTGGTGTTGGGACAGTGATAGAAGACAATGATGCTAGATCTTTGATGGCAGCCACGGCTCTAAAATCATGCCAAGAGACCCTGGACAAGTTGAAAGAGATACAAGCTCAATCATCCAAAGAAGCTAAAGAGGAGTATCAAAGGGTTAAGAAAGCTCACGAGATGTTTGAGACCCTTAGAGACCAATTCATTTCTAAATATATGACGGGTGAACTAGACCATGATGATGGGGAGAAGAGCAAGAGTGAAGGAACAGATAGAAAATGCATAGATGAAGAGATGGATCGGTTGGAGCAAGAGGCGAGTGATGTGGGGCAATTGAGAGAGAAGATTAAACGAAAGTTGGAGGAAGATCCAAGGAACTCCTTCACTGTGACTGAAATGGCTGAGTGCATTGATGAGCTTGTAAATAAGGTTTGTACCTTGGAAACCGCGGTTTCATCTCAGACTGGTTTGGTAAAGAGACTAAGATCAGACACAGATGGACTTCAGACAAACATAAGAAAGTTGGAAGAAGACAAGGAAATGCTCATAGAAGGCTCAGAAGTTACCAAGAAGAAGCTAAAGGAATTAGAGAGAGAGTTGTGGAGAGTTAAAATGCTCAACCGAAGTGTCAGAAGTCAAGACAACACCCTCCAAACGCACTTTACTGAAGCAAGCTGTAACCTTGAGCACCTTTCTGGAAAATTGATTCACATGAAGCCAGATGAGGAGGAGGAGAACTTGGTACTTTACAGGAAGAAGAGAACCGCTTCTGATGGTATTCCCGGGAAACAGTCTGCAAAACATGGTGTTGACTTCTCTGTGGATAACTCAGATGTCAAGAGTATAAAGGAAAACGATGGTGCAAATGTTGATAAGAACAAGTATAATTCGGTTGGCAGTAGTTTTCTTAATGAAAGGATTCAGAAGCTGCCACTCCATGAAAATGATTATTTATCTGACACAATGAGCAATATTGACAATGAATCACAGGAGTTGGCCACTAGTGAGGGAGATCAACCTAACTGGAGGCAGATGTTTATGAGTGGATTAGATGACAGAGAAAAGATTCTGCTGGAGGAGTACACATCAGTTTTACTCAACTATAAGGAGGTCAGGGGGAAGCTCAATGAGGTGGAAAAGAAAAGCCGTGACAGCATTTTTGAGTTGACACTTCAGCTAAGGGAGATGAAGAATGCTCTTGTCGCAAAGGATAAAGAGATACAGTCTTTACATCAGAAGCTAAACTCTCCAGATGCAAATCCTGATGAAAGTCCCTACAGTAACACCACAGAATACAAATATACACCCAATGAAGCACTATTTCGAAAAGTAAGTCAAAGAGCATATGGGTCAGACTCAGAAATTTTACGTTTAAATACAGATCCAAATGCAGTCACAACCCCTTTCTCAGAATATCAAGGTGAAACTGAAAGCACGAGAAATATGTACGTATCATCTTTGAAAATGACACTTCAGAAGCTCATGGAACATCAGGATAAGCGCCATGACCTTTCAAACTTGGAACAGAAATTCCGTTCAGACATCGACGACTTAATGGAAGAGAACTTGGAGTTCTGGTTGAGGTTTAGCACTCTAGTTCATCAGATACAAAAGTTCCAAAACTCTATTCAGGACTTAAAAGCTGAGCTGAAAATAATAAGGGAAAGAAACAAGTCTGAAGGGTATTCACATCATAAACAACAGCCTATACAATCTGAACTCAGGCCAATATTCAGACACCTTAGAGAAATAAGAACTGAGTTATCACTGTGGGTGGAACACAATGCAGTGCTTCAGGATGAACTGCAAGGAAGGTACTCATCTTTGAGCAACATCCAAGATGAGATTGCAAGAGCGGGGAACGCCGAATCCGGCGCCGACCAGGCTGAGCTAATTAGCAAGTACCAAGGTGCAAAGTTTCAAGGTGAGATTCTGAACATGAAGCAAGAGAACAGCAAGGTTGCAAGTGAACTACAAGCCGGTCTTAGCCTTGTGAAGGGGATGAAAGTTGATGTTGAGAAGACCCTTGATGAGCTAGATGAAGCTATTGGTGTTAATAGTAGTACTGATAAGAATGCCAGCGAGATGAAAAAATCCAGTAGTCGTGCTCGAATACCCTTGAGGTCTTTCTTGTTTGGAGTCAAGTTAAAGAAGCAAAAAAATCATCCTTCACTGTTTGCATGTGTCAACCCAGCGTTGCAAAGACAACACAGTTTCAATGAAGCACCAGCTCCAATGTAG 2940 0.4194 MLQRAASNAYSWWWASHIRTKQSKWLDQSLHDMEEKVAETLAVLRDEGDSFAKRAEMYYKKRPELVNFVEETFRAYKALADRYDHLSKELQSANRTIASVFPDQVPCHIEEDEEEESDTGTNTLSSDPNNNQTHDKPSIPKVPKTPKKDFRSPSMLISRKGTLKKTASSAKYIPTISCSGLTKVEALAEIDKLQKEILSQQTEKEFVRSLYERAYGKYWEIEDQIAATQKRVCSLQDEFGVGTVIEDNDARSLMAATALKSCQETLDKLKEIQAQSSKEAKEEYQRVKKAHEMFETLRDQFISKYMTGELDHDDGEKSKSEGTDRKCIDEEMDRLEQEASDVGQLREKIKRKLEEDPRNSFTVTEMAECIDELVNKVCTLETAVSSQTGLVKRLRSDTDGLQTNIRKLEEDKEMLIEGSEVTKKKLKELERELWRVKMLNRSVRSQDNTLQTHFTEASCNLEHLSGKLIHMKPDEEEENLVLYRKKRTASDGIPGKQSAKHGVDFSVDNSDVKSIKENDGANVDKNKYNSVGSSFLNERIQKLPLHENDYLSDTMSNIDNESQELATSEGDQPNWRQMFMSGLDDREKILLEEYTSVLLNYKEVRGKLNEVEKKSRDSIFELTLQLREMKNALVAKDKEIQSLHQKLNSPDANPDESPYSNTTEYKYTPNEALFRKVSQRAYGSDSEILRLNTDPNAVTTPFSEYQGETESTRNMYVSSLKMTLQKLMEHQDKRHDLSNLEQKFRSDIDDLMEENLEFWLRFSTLVHQIQKFQNSIQDLKAELKIIRERNKSEGYSHHKQQPIQSELRPIFRHLREIRTELSLWVEHNAVLQDELQGRYSSLSNIQDEIARAGNAESGADQAELISKYQGAKFQGEILNMKQENSKVASELQAGLSLVKGMKVDVEKTLDELDEAIGVNSSTDKNASEMKKSSSRARIPLRSFLFGVKLKKQKNHPSLFACVNPALQRQHSFNEAPAPM 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01213 979 Coils Coil 626 646 - -
Phco3g01213 979 Coils Coil 391 432 - -
Phco3g01213 979 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 90 IPR011684 GO:0003779
Phco3g01213 979 PANTHER PROTEIN NETWORKED 2D 1 972 - -
Phco3g01213 979 MobiDBLite consensus disorder prediction 121 138 - -
Phco3g01213 979 MobiDBLite consensus disorder prediction 111 153 - -
Phco3g01213 979 Coils Coil 762 789 - -
Phco3g01213 979 Coils Coil 76 96 - -
Phco3g01213 979 Pfam KIP1-like protein 11 84 IPR011684 GO:0003779
Phco3g01213 979 Coils Coil 183 203 - -
Phco3g01213 979 Coils Coil 328 355 - -
Phco3g01213 979 MobiDBLite consensus disorder prediction 645 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01213 Phco-Chr3 10743381 10747072 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01213 3 10743381 10747072 Phco3g01213 3 10743381 10747072 ECH
Phco3g01213 3 10743381 10747072 Phco7g01062 7 8780256 8784214 PCT