Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01208 ATGAGCGGAGAAGAGAGCAAGGGTTCTGCTTTTCTGGGAACCAACACCGCTTATTCAGGTTTTCTTCTTGACCCTGCAAAATGGGGTGTGCTGAGTTTGCCAGAAAAACAAAGACTAGTCCACGAGATTGCTCGACAGTCAAAAGATGCCTCTAATTTGCTTCAGACATTTACACGCAGGGAACTTCTAGAAATAATCTGTGCTGAATTAGGCAAAGAGAGGAAGTACACAGGCTATACCAAGAGTCAAATGATAGAACATCTTCTGAAGATAATTTCTAAGAACTCTAACTTGCATGTCATCGGAAATATGCCTGCTCCTACCAGAAGTTGCATTGGATCTAAAAGGAAAAGGAAACCTGCATCTGAGGATTTACATCATGCTCCTCTAGAGAACATTAAAGAGGAAATAGTTAAAACCTTTTTGTGTCAAAATGTTGCGTGCAAAGCTACATTGAATCCAGAAGATTCTTTTTGCAAGAGATGTTCTTGTTGCATATGTCATTGCTATGATGATAACAAGGATCCTAGTTTGTGGTTGACCTGCAGCTCCGATCTTCCCAATGAAGAGTCATGTGGAATGTCCTGTCATTTGCAATGTGCTTTGAGTAATCAAATGTCTGGCATTTTGAAGGGTAGTTGTGGTATTAAGTTAGATGGAGCCTTCTGTTGTGTTTCTTGTGGAAAAAGTAATGAACTGATGAAGACATGGCGAAAGCAATTATTGGTTGCCAGAGAAGCGAGAAGAATGGATATACTGTCTTTGCGAATGTCCCTGGCTCACAGAATTCTCGTAGGAACAGAAATGTACAAGGAACTGCAAAAGATTGTAGAATCTGCTCTCAAATTACTGGAGAATGAAGTGGGATCCCTTGATCATGTATATGCGAGGATGACACGTGGAATTGTAAGCAGGCTTTCGTGTGGTGCTGAGGTTCAGAGATTGTGCTCTACTGCAATTGAATGTTTTGATTCAAAGTTTTCTGACCTTTTCTCTGTTTGTGTGGAAAAGAAAGATGCACCAACATGTTCAATTCGTTTTGAAGAGTGTCTTCCTACTTCAGTGGTTATCGTGCTCGAGTACAATGACAAACTTTTAAAGAACTTTCTAGGCTGCAGGCTTTGGCACCGGGTATCAACAACAGACTACCCTGAACAACCCACCTTCATTTTCTTGAGGCCTGAGAAAAGATTCAAGCTAGAAAACCTCCATCCTTCAACTGAGTACTTTTGCAAGGCTTCTCTGTTCAGCAGCACAGGGATTTTGGGTGCTGCAGAAGCTAAATGGGTGACCCAGTGTGAGCCCACCAATTCTGCAAAAGCTATAACTTGTGGCGGAAATAGATTTCGATGGTCCCCGCAGAGATCTTCAGGTACAGGAGTGGAAATGTGTGCACAGGACCATATAACCACAGAGTCTGCCAACTCTGACATGAAGTTATCATCTCGACAACATCCTGGGAAACCCATCATTTTGAACATCAGGGGCAGGTTTGAAGAGTTCCTCTCCAAGCCTCAGTCGCTAGAGCCTTTTTCATATAAAAATCTTGCTGCAGTTTCACCTTCCACACCTTCTAAATCTTATGAAATGAGGCAAATTCCTGGTTTGAATTCTAGAAAGCGGTCGAAGGAAAATGACTACGAGTATTCTGTGAGGGTGGTGAAATGGTTGGAGCATCTAGGCCACATAGATGAAATCTTCAGAGTAAGATTTCTGACTTGGTTCAGCCTCAAGGCTACTCAACAGGAGAGAAGGGTGGTTAGTGCTTTTGTTGATGCATTGATTGACGACCCAGCAAGCTTAGCAGACCAGCTCATACACACTTTCAGTGATGAAATATGTTGCGAGCAAAAACCCTTGTGA 1863 0.4235 MSGEESKGSAFLGTNTAYSGFLLDPAKWGVLSLPEKQRLVHEIARQSKDASNLLQTFTRRELLEIICAELGKERKYTGYTKSQMIEHLLKIISKNSNLHVIGNMPAPTRSCIGSKRKRKPASEDLHHAPLENIKEEIVKTFLCQNVACKATLNPEDSFCKRCSCCICHCYDDNKDPSLWLTCSSDLPNEESCGMSCHLQCALSNQMSGILKGSCGIKLDGAFCCVSCGKSNELMKTWRKQLLVAREARRMDILSLRMSLAHRILVGTEMYKELQKIVESALKLLENEVGSLDHVYARMTRGIVSRLSCGAEVQRLCSTAIECFDSKFSDLFSVCVEKKDAPTCSIRFEECLPTSVVIVLEYNDKLLKNFLGCRLWHRVSTTDYPEQPTFIFLRPEKRFKLENLHPSTEYFCKASLFSSTGILGAAEAKWVTQCEPTNSAKAITCGGNRFRWSPQRSSGTGVEMCAQDHITTESANSDMKLSSRQHPGKPIILNIRGRFEEFLSKPQSLEPFSYKNLAAVSPSTPSKSYEMRQIPGLNSRKRSKENDYEYSVRVVKWLEHLGHIDEIFRVRFLTWFSLKATQQERRVVSAFVDALIDDPASLADQLIHTFSDEICCEQKPL 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01208 620 Pfam PHD - plant homeodomain finger protein 143 262 IPR032881 -
Phco3g01208 620 CDD PHD_VIN3_plant 163 227 - -
Phco3g01208 620 PANTHER VIN3-LIKE PROTEIN 2-RELATED 21 442 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01208 Phco-Chr3 10660087 10664154 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01208 3 10660087 10664154 Phco3g01208 3 10660087 10664154 ECH