Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01180 ATGGAGGCAATAAAACTGATACGATTCTCTTTCTCTTCACCTTTTTCAATCGTCACGCCGTTTTCCATCTCAACAAAACACACTCAAACACCAACCACTCCCACTCTCCAAATTCAATTCCCCGTTCCCTCCCAATTTCCAAACCCTAGCTCCATGGATTCCCGCGACTCCTCCCCTCGCTCCCGCGACCCCGACGCCGACAACCACCACCACTCCTTCGACGATCCCCCGCCCTCCCTCCACTCCAAGGTCAAGCTCATGTGCAGCTACGGCGGCCGAATCCAGCCCCGCCCCCACGACAACCACCTCACCTACGTCGCCGGCGACACCAAGATCCTCACCGTAGACCGCCACATCAAGCTCCCCGCCCTCCTCACCAAACTCTCCTCCCTCGCCAACGCCCCCGCCAACGCCCCCGCCAACGCCACCTTCTTCAAGTACCAGCTCCCCGGCGAGGACCTCGACGCCCTCATCTCCGTCACCAACGACGAAGACCTCCACCACATGATGCTCGAGTACGATCGCCTCTCCCGCACTTCGCCTAGACCCGCACGCCTCCGCCTCTTTCTGTTCCCGCTCCATAACAATAACAGCAACATCAATTTCGCACTCACCGATTCCAAACCCGAGCGCCAGTGGTTCGTCGACGCTCTCAACTCCGTTCAGGTTCCGCTTCTCGAAGGTTCTCCCCCGCCGCCTACGGCAGCCCCGAATCCAGATTTTCTCTTCGGATTAGATAAGCCGCCGCCGGCTCCCGAGGCTCCGCCGAAGAATCCTTCCCCGGAATCGGAATGCTTCCCCGAGGATCGTCCGGCGGTCAGAGATACCGAAACCGAAACCGGAACCGAACGCGTGCCCGAAGCTGAGATTCGGAGGTTGCAGATTGGTAACAATAATGAGCAACTATTGCAACGGAAGTTGAAACTAGAGGAAGATAATAACGGTAGGGTTAACGGCGCGGAAGCTTTCTCTCAGACGAACACGGAGAATGTGACGCCGTTAGTTGGTCAAGGTTTTCACTCTGGAACGGTGACGTTTTTGCAGGAGAGGAATAATGTGGGTTATTCGTTCGCGGTTCCTACGACCGGGAGTCAGATTTATCTCATTCAGACGCCTTCTGGAATCTTCCAAGCAGTTCGGCCTGTGACTGGACCGGTGGGGCAACCGGTTTATCTGGTTCCGGCGCCTAGTTCGGTTGGTGTGGCGGCGGAGCGTGGATATTCTGCGGGACAGGGTGGAGCGCGGTGGTGA 1251 0.5739 MEAIKLIRFSFSSPFSIVTPFSISTKHTQTPTTPTLQIQFPVPSQFPNPSSMDSRDSSPRSRDPDADNHHHSFDDPPPSLHSKVKLMCSYGGRIQPRPHDNHLTYVAGDTKILTVDRHIKLPALLTKLSSLANAPANAPANATFFKYQLPGEDLDALISVTNDEDLHHMMLEYDRLSRTSPRPARLRLFLFPLHNNNSNINFALTDSKPERQWFVDALNSVQVPLLEGSPPPPTAAPNPDFLFGLDKPPPAPEAPPKNPSPESECFPEDRPAVRDTETETGTERVPEAEIRRLQIGNNNEQLLQRKLKLEEDNNGRVNGAEAFSQTNTENVTPLVGQGFHSGTVTFLQERNNVGYSFAVPTTGSQIYLIQTPSGIFQAVRPVTGPVGQPVYLVPAPSSVGVAAERGYSAGQGGARW 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01180 416 MobiDBLite consensus disorder prediction 263 287 - -
Phco3g01180 416 Gene3D - 104 192 - -
Phco3g01180 416 MobiDBLite consensus disorder prediction 26 55 - -
Phco3g01180 416 MobiDBLite consensus disorder prediction 56 78 - -
Phco3g01180 416 MobiDBLite consensus disorder prediction 26 80 - -
Phco3g01180 416 SUPERFAMILY CAD & PB1 domains 99 197 - -
Phco3g01180 416 CDD PB1_UP2 87 191 - -
Phco3g01180 416 PANTHER OS05G0427100 PROTEIN-RELATED 53 293 - -
Phco3g01180 416 MobiDBLite consensus disorder prediction 226 262 - -
Phco3g01180 416 Pfam PB1 domain 100 192 IPR000270 GO:0005515
Phco3g01180 416 SMART PB1_new 98 193 IPR000270 GO:0005515
Phco3g01180 416 MobiDBLite consensus disorder prediction 225 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01180 Phco-Chr3 10305541 10306791 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01180 3 10305541 10306791 Phco3g01180 3 10305541 10306791 ECH