Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01172 ATGCCGAATCCCGAGGCTAACCGCAGCCAACACTCACGCTCCCGGGGCCGTCCCTCCACGTCAGCGCCGCCGCGGCCCCCGGCCCGGGCCTCTCTGCGCCAGCTGCTTCGCGTGGCGTCAGTGGCGAGCGGGATTCAGTTCGGTTGGGCCTTGCAGCTCTCCCTCCTCACTCCCTACGTCCAGCAGCTCGGCATCCCTCACCAATGGGCCAGCATCATCTGGCTCTGTGGCCCCGTCTCCGGCCTCTTCGTCCAGCCTCTCGTCGGCCACTTGAGCGACCGCTGCACCAGCCGCTTCGGCCGCCGCCGCCCCTTCATCTTCATCGGCGCCATCGCCATCATCATCGCCGTCATCATCATCGGCTACGCCGCCGACATCGGCTGGCTCCTAGGCGACACCGATTCCTACCGACCTGCCGCCATAACTGTCTTCATAATCGGCTTTTGGATCCTCGACGTCGCCAACAACGTAACGCAAGGTCCCTGTCGAGCCTTGCTCAGTGATCTCACCAGAAAGGATCCTCGAAGGACACGCGTTGCAAATGCTTATTACTCACTGTTTATGGCCATTGGTAATATTCTTGGCTATGCAACTGGATCATACAGTGGTTGGTACAAGATTTTTGCTTTTACACTTTCTCCTGCTTGCACAATTAGTTGTGCAAATCTCAAGTCTGCTTTCTTTCTTGACATTGCTTTCATTGCGGTCACAACATATATCAGCATCATGGCAGCTCATGAAGTGCCTCTAAATTCTAATGTGGTAGCCCATGCTGAAGCAGGGGCCGAGGAGTCAGGTAGTGCCGAAGAAGCTTTCATGTGGGAATTATTTGGGACATTAAAATATTTTTCAACCCCTGTATGGATAATTCTGTCTGTTACTGCTCTCACATGGATTGGGTGGTTTCCATTTACTCTATTTGATACTGATTGGATGGGTCGAGAGATTTATGGTGGTGATCCAAATCAAGGCCTTACTTATGATACTGGAGTTAGAATGGGAGCACTTGGTTTGTTGCTTAATTCAGTTGTTCTTGCATTAACATCATTGCTCATGGAAAGGTTATGCAGGAAGAGGGGGGCTGGTTTTGTTTGGGGAATCTCAAATCTCGTGATGACATTTTGCTTTCTTGCAATGTTAGTATTAACCTATGTGGCAAGTAACATAGGCTATGCAGGCAAAGATCTACCTCCACCTGGCATTGTGATAGCTGCGTTGATTATCTTTACCATTCTTGGGTTTCCACTGGCAATCACTTACAGTGTTCCGTATGCCTTAATTTCCACACATATTGAGTCTTTGGGACTTGGCCAAGGGTTATCAATGGGTGTCCTGAATCTGGCAATAGTGGTCCCACAGATAATAGTGTCACTGGGAGCTGGACCGTGGGATCAGCTATTTGGTGGAGGAAACTCCCCAGCCTTTGCTGTGGGAGCTGTTTCAACCATTATCAGTGGACTTATAGCAATCTTGGCTATTCCTCGATCTGGTGCTCAAAAGGCTCGAAGCCTTGCGTGA 1518 0.5072 MPNPEANRSQHSRSRGRPSTSAPPRPPARASLRQLLRVASVASGIQFGWALQLSLLTPYVQQLGIPHQWASIIWLCGPVSGLFVQPLVGHLSDRCTSRFGRRRPFIFIGAIAIIIAVIIIGYAADIGWLLGDTDSYRPAAITVFIIGFWILDVANNVTQGPCRALLSDLTRKDPRRTRVANAYYSLFMAIGNILGYATGSYSGWYKIFAFTLSPACTISCANLKSAFFLDIAFIAVTTYISIMAAHEVPLNSNVVAHAEAGAEESGSAEEAFMWELFGTLKYFSTPVWIILSVTALTWIGWFPFTLFDTDWMGREIYGGDPNQGLTYDTGVRMGALGLLLNSVVLALTSLLMERLCRKRGAGFVWGISNLVMTFCFLAMLVLTYVASNIGYAGKDLPPPGIVIAALIIFTILGFPLAITYSVPYALISTHIESLGLGQGLSMGVLNLAIVVPQIIVSLGAGPWDQLFGGGNSPAFAVGAVSTIISGLIAILAIPRSGAQKARSLA 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01172 505 NCBIfam sucrose/proton symporter 31 496 IPR005989 GO:0005886|GO:0008515|GO:0015770
Phco3g01172 505 SUPERFAMILY MFS general substrate transporter 33 497 IPR036259 -
Phco3g01172 505 CDD MFS_SLC45_SUC 35 491 - -
Phco3g01172 505 FunFam Sucrose transport protein 29 493 - -
Phco3g01172 505 Pfam MFS/sugar transport protein 50 432 - -
Phco3g01172 505 MobiDBLite consensus disorder prediction 1 28 - -
Phco3g01172 505 Gene3D MFS general substrate transporter like domains 32 252 IPR036259 -
Phco3g01172 505 Gene3D MFS general substrate transporter like domains 284 502 IPR036259 -
Phco3g01172 505 MobiDBLite consensus disorder prediction 1 19 - -
Phco3g01172 505 PANTHER SUGAR TRANSPORTER 29 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01172 Phco-Chr3 10136339 10144523 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01172 3 10136339 10144523 Phco3g01172 3 10136339 10144523 ECH