Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00849 ATGGATTCTGGAAATTCTAAGGAGGAGTTGACGAACGATTCATCAGATAAAGTGAGTTACGATCTGGCAGAGTGCACATTGGAAGGAAAATGGGATAAGGTTAAGATGATGTACAAAGATTTCCCAGAGTGTCACACGGTAATGATTGACGATTCCGTGGGCACTGCACTGCACGTGGCCGTGGATTTGGACGAAGAAGATGTGGTTTGTGCCCTTGTGAATGAAATTATCAAACACAAACAGGAAGGGAAGATCAAGGCACTGGAAATGGGGAACGATCGAGGGGATACCCCTCTTCATGTTGCGGCTTCGAGGGGTTTCGCAAAGATATGTAGGTGGATCGTAGGAACGAACAAGGAGAGGATTTACTTGGTGAGTCGAAAGAACAAAAAGGGAGAGACACCTCTCTTTGGAGCTGCTATCAACTGGAAGAAACAAGCCTTTGCTTATCTTTCTAACCTTTCCGACCACAGCGCTCCCTTGCAAGATCTTGTGCGTCACAATGATGACACTATTCTTCACTGTGCTATCGAGAGAGAGTACTTTGATTTGGCTGTGATAATAGTGCATTACTATGATTTCCTTAGCACACATACGAATAAAAAGGGATTCACTCCTCTCAAACTCCTTGCAACCAGGCCCTCGGCTTTCAAAAGTGCTACCAAACTTTCATGGTGGAAGCGAATCCTGTACCACTGTATACTTGTAGAGCCACTGGACCCTAAGAAACAAATGAAAGCGAATCTGGGAAAGATAGTGGAGAATCCCAAGTCTGATAAAGTGGATTATCCAAAGAACTATGCCACATTATATGATTTCTTTGCTCGATCGTTTAGTGTTGCTGCTCTATTTGGAAAAATGCCCACGAGAAAGAATCAGCATGACACAGAAAACCCGTCATCCAAAAACTGTACCAATGAATTGGGAACTCCCCAGGTTGGATTTTTGCCTCCAAATTATGAAACCTCTCAACAATTTCTTAGGTCTGCATATGTACATACTCTTGGCCTCTCAGGAGTGGAATTAAAGGAATTAAGAAAGACAAAGAAGAGGCATGAATGGAGTCGTCAACTCTTGAAGGCACTATTGGAAAGACCTTATGCATCCTTTACAGGAAGTGGAGGTGTCCCAACCGATATGGAAGTTGAAACAGATATGTATCATGTTTATAGCCAATATAAACAAGGTGAAACCAGTGAATTAGGATGGTCGGAAGAAGAAAATGAAACAGATGTTGATGACAAAAAGGCTGTAGATCGAAGTGAGACCATGAAGAAGGAATCCGATCGACTAGCTGAAGAAGAAAAGATTGACAAAAAGGAGACACCATTTTTGGTTGCAGCAAGATATGGCATAGTTGAAATGGTGAATGAAATGTTATATCGAATTCCAAGTGCCATCCATAACACTAACTCAAAGAAAGAAAATGTGTTGCTTGTGGCTGTGCGGAATAGGCAACCCCTTGTTGTTCAGAGTTTGAAAATGAAGATGCAGTCAAAACCAGAAGTTTGGAATAACTTAATTCTGACAGTAAGTGAAGATGAGAGCACCATGTTACACTTGGCAGCATATGCTCCTGACAGCAATAAACCTTGGCAGATAGCTGGTTCTGCCTTACAAATGGTGTGGGATATAAAGTGGTTTCAGTATATTAAAGGCCTTGTGCCACAACACTTTTCCTTTAGAAGTGACAAGAGGAGGAAAACCGCAGGGGAAATCTTCGAGGAAACACATAAAGAACTCATAGAGGAAAGTGGAGAGTGGCTGAGGGATACGTCTGAATCTTGTTCTGTTGTGGCTGCACTTGTTGCTGGTGTTTCCTTCACTGCAGCCAACAGCATCCCTGGTAGCACCAACGAGGAAGGTAGGCCTAATTTAGAAGGCAAGCCTGCATTCGATGTATTTGCCATTGCTTCGCTTGTTGGACTTTGTTTTTCCGTCACTGGTCTCATAATGTTCCTTACCATCCTCACTTCTCGAAAGCAAGCCAAAGATTTTCGCAGAGATTTGCCACTCAAACTTCTTCTTGGCTTGAGTTCTCTTTTCGTATCCATTGCTGCAATGCTTGTTTCTTTCTGCACCGGCCATTTTTTTCTGCTTAGTCACAGATACAAGACGATCCTATACCCCATTTATGCAGCCACTGTTTTTCCTGTCACTTTCTATGCTGTGGCACAGTTTCCTCTATACTTTGATCTTCTAACAGCCATTTTAACTACGGTTCCACGATCAAGTGATAAAGGAGATAAGTTGTAG 2256 0.4255 MDSGNSKEELTNDSSDKVSYDLAECTLEGKWDKVKMMYKDFPECHTVMIDDSVGTALHVAVDLDEEDVVCALVNEIIKHKQEGKIKALEMGNDRGDTPLHVAASRGFAKICRWIVGTNKERIYLVSRKNKKGETPLFGAAINWKKQAFAYLSNLSDHSAPLQDLVRHNDDTILHCAIEREYFDLAVIIVHYYDFLSTHTNKKGFTPLKLLATRPSAFKSATKLSWWKRILYHCILVEPLDPKKQMKANLGKIVENPKSDKVDYPKNYATLYDFFARSFSVAALFGKMPTRKNQHDTENPSSKNCTNELGTPQVGFLPPNYETSQQFLRSAYVHTLGLSGVELKELRKTKKRHEWSRQLLKALLERPYASFTGSGGVPTDMEVETDMYHVYSQYKQGETSELGWSEEENETDVDDKKAVDRSETMKKESDRLAEEEKIDKKETPFLVAARYGIVEMVNEMLYRIPSAIHNTNSKKENVLLVAVRNRQPLVVQSLKMKMQSKPEVWNNLILTVSEDESTMLHLAAYAPDSNKPWQIAGSALQMVWDIKWFQYIKGLVPQHFSFRSDKRRKTAGEIFEETHKELIEESGEWLRDTSESCSVVAALVAGVSFTAANSIPGSTNEEGRPNLEGKPAFDVFAIASLVGLCFSVTGLIMFLTILTSRKQAKDFRRDLPLKLLLGLSSLFVSIAAMLVSFCTGHFFLLSHRYKTILYPIYAATVFPVTFYAVAQFPLYFDLLTAILTTVPRSSDKGDKL 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00849 751 Gene3D - 13 230 IPR036770 -
Phco3g00849 751 PANTHER CASKIN 52 155 - -
Phco3g00849 751 Pfam Ankyrin repeats (3 copies) 57 152 IPR002110 GO:0005515
Phco3g00849 751 MobiDBLite consensus disorder prediction 409 434 - -
Phco3g00849 751 SMART ANK_2a 94 124 IPR002110 GO:0005515
Phco3g00849 751 SMART ANK_2a 168 197 IPR002110 GO:0005515
Phco3g00849 751 SMART ANK_2a 439 469 IPR002110 GO:0005515
Phco3g00849 751 SMART ANK_2a 52 81 IPR002110 GO:0005515
Phco3g00849 751 SUPERFAMILY Ankyrin repeat 50 215 IPR036770 -
Phco3g00849 751 FunFam Uncharacterized protein 19 247 - -
Phco3g00849 751 Pfam Domain of unknown function 587 698 IPR026961 -
Phco3g00849 751 Gene3D - 407 538 IPR036770 -
Phco3g00849 751 MobiDBLite consensus disorder prediction 398 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00849 Phco-Chr3 7132904 7138811 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00849 3 7132904 7138811 Phco3g00849 3 7132904 7138811 ECH