Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00848 ATGGATGCTGGAAACTCTAAGGAGGAGTTGACGAACGATTCATCAGATAAAGTGAGTTACGATCTGGCAGAGTGCACATTGGAAGGAAAATGGGATAAGGTTAAGATGATGTACAAAGATTTCCCAGAGTGTCACACGGTAATGATTGACGATTCCGTGGGCACTGCACTGCACGTGGCCGTGGATTTGGACGAAGAAGATGTGGTTTGTGCCCTTGTGAATGAAATTATCAAACACAAACAGGAAGGGAAGATCAAGGCACTGGAAATGGGGAACGATCGAGGGGATACCCCTCTTCATGTTGCGGCTTCGAGGGGTTTCGCAAAGATATGTAGTTGGATTATAGGAACGAACAAGGAGAGGATTTACTTGGTGAGTCGAAAGAACAAAAATGGAGAGACACCTCTCTTTGGAGCTGCTATCAACTGGAAGAAACAAGCCTTTGCTTATCTTTCTAACGTTTCCCGCGCTCCCTTGCAAGATCTTGTGCGTCACAATGGCGACACTATTCTTCACTGTGCTATCGAGAGAGAGTTCTTTGATTTGGCTGTGATAATAGTGCATTATTATGATTTCCTTAGCACACATAAGAATAAAGAGGGATTAACTCCTCTCACAGTCCTTGCCACTAGGCCCTCGGCCTTCAGAAGTGCTACTAAACTTCCATGGTGGAAGCGAATCCTCTACCACTGTATGCTTGTGGAACCAGTGGACCCTGAAAAACAAATGAAGAAAAATTTGGAAAAGATGAAGAAGCAACCAGAATCTGACGAACTGAATTATCCAAAGAACTATGTCACATTATGTGACTTCTTTGCTGGATTCAGAGCTCTTGCTGCTCCAATTGAAAACCCATCAAAGAAGAAGCGTAAAACCGTATTTGAAGCTGCGGAGGTTGGATTTTTGCCACCAAATTATGAAACCAGTCAACAATTTTTAAGGTCTGCATATGTACATACTCTCGGGCTCTCAGGAGTAGCATTAAACGAAATAAGGAATACGAAGAAGAGGCATGAATGGAGTGGTCAACTCTTGAAGGCACTATTGGAAAGACCTTATCCAGCATCCACAGGAAGTGGGGGTGTCCCAATGGATCAGGAAGTTGAAACAGATATGTATAATGTTTATAACCAATATAAACAAGGTGAAGCTAGCGAATTGAGATGGTTGAGAAAGGAAGAAAAAGAAATACAGGCTATAGACAAAAAAACTTTAAGCCCAAGTGACAAAATTAAGAAAGAAACTGATAAAGATGCTGAGAAGAAAATTGACAAAACGGAGACAGCATTTCTGGTTGCGGCAAGATATGGCATACTTGAAATGGTGAATGAAATTTTAAACCGAATTCCAAGTGCCATCCATGAGACTAATTCAAATAAAGAGAACGTGTTGCTGGTGGCAGTGATTCACAGGCAACCCTTTGTTCTTGAGAATTTGAAAATGAAGATGCAGTCAAAACCAGAAGTTTGGAATAATTTAACTCTTACAGTAGATGAAAATGAGAACACCATATTGCACTGTGCAGCAGATGCTCGACGGGACAAGTCTCCACAGATAGCTGGTTCTGCCTTGCAAATGATGTGGGATATAAAGTGGTTTCAGTATATTAAAAGCCTTGTGCCACAACACTTTTACTTTAGAAGCAACAAGCGGGGCAAAACTGCAGGGGAAATATTCGAGGAAACACATAAAAGCCTGATAAAGGAAAGTGGAGATTGGTTGAAGGACACATCTGAATCTTGCTCTGTTGTGGCTGCACTTGTTGCTGGTGTTTCCTTTGCTACAGCCAGCGCCATCCCCGGTGGCACCGATGAAGAAGGTAGGCCTCGTTTAGAAGGCAAGCCTGCATTCGATCTATTTGCCGTTGCTTCACTTGTTGGACTTTGCTTCTCTGTCAATGGACTCATAATGTTCCTTACCATTCTCACCTCTCGAAAGCAATCCAAAGATTTTCGCATGTCTTTGCCATTCAAAGTTCTTCTAGGCCTGAGTTCTCTCTTTGTATCCATTGCTGCAATGTTTGTCTCTTTCTGCTCCGGTCATTATTTTCTGCTTAGTCACAGATTCAAGATGGTTCTATACCCCATTTATGCAGCCACTGTTTTACCAGTCATTTTCTATGCTGTGGCGCAGTTTCCTCTTTACTTTGATCTTATAACGGCCATTTTAGCTACGGTGCCATGGACAGCAGATAAAGAAGCCAAGTTATAG 2211 0.4229 MDAGNSKEELTNDSSDKVSYDLAECTLEGKWDKVKMMYKDFPECHTVMIDDSVGTALHVAVDLDEEDVVCALVNEIIKHKQEGKIKALEMGNDRGDTPLHVAASRGFAKICSWIIGTNKERIYLVSRKNKNGETPLFGAAINWKKQAFAYLSNVSRAPLQDLVRHNGDTILHCAIEREFFDLAVIIVHYYDFLSTHKNKEGLTPLTVLATRPSAFRSATKLPWWKRILYHCMLVEPVDPEKQMKKNLEKMKKQPESDELNYPKNYVTLCDFFAGFRALAAPIENPSKKKRKTVFEAAEVGFLPPNYETSQQFLRSAYVHTLGLSGVALNEIRNTKKRHEWSGQLLKALLERPYPASTGSGGVPMDQEVETDMYNVYNQYKQGEASELRWLRKEEKEIQAIDKKTLSPSDKIKKETDKDAEKKIDKTETAFLVAARYGILEMVNEILNRIPSAIHETNSNKENVLLVAVIHRQPFVLENLKMKMQSKPEVWNNLTLTVDENENTILHCAADARRDKSPQIAGSALQMMWDIKWFQYIKSLVPQHFYFRSNKRGKTAGEIFEETHKSLIKESGDWLKDTSESCSVVAALVAGVSFATASAIPGGTDEEGRPRLEGKPAFDLFAVASLVGLCFSVNGLIMFLTILTSRKQSKDFRMSLPFKVLLGLSSLFVSIAAMFVSFCSGHYFLLSHRFKMVLYPIYAATVLPVIFYAVAQFPLYFDLITAILATVPWTADKEAKL 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00848 736 Pfam Domain of unknown function 572 683 IPR026961 -
Phco3g00848 736 Gene3D - 363 570 IPR036770 -
Phco3g00848 736 SUPERFAMILY Ankyrin repeat 24 492 IPR036770 -
Phco3g00848 736 Gene3D - 13 231 IPR036770 -
Phco3g00848 736 SMART ANK_2a 500 532 IPR002110 GO:0005515
Phco3g00848 736 SMART ANK_2a 166 197 IPR002110 GO:0005515
Phco3g00848 736 SMART ANK_2a 425 455 IPR002110 GO:0005515
Phco3g00848 736 SMART ANK_2a 94 124 IPR002110 GO:0005515
Phco3g00848 736 SMART ANK_2a 52 81 IPR002110 GO:0005515
Phco3g00848 736 FunFam Uncharacterized protein 19 245 - -
Phco3g00848 736 PANTHER CASKIN 52 721 - -
Phco3g00848 736 Pfam Ankyrin repeat 95 117 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00848 Phco-Chr3 7127321 7131202 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00848 3 7127321 7131202 Phco3g00848 3 7127321 7131202 ECH